Schumer lab: Lab github
Lab github
Out lab GitHub is maintained here:
On sherlock, our lab repositories are linked to our shared bin:
/home/groups/schumer/shared_bin/Lab_shared_scripts
Tutorials in using github
Once you have a GitHub account and have done some tutorials, ask to get added to our lab GitHub
Tutorials:
https://product.hubspot.com/blog/git-and-github-tutorial-for-beginners
https://kbroman.org/github_tutorial/
Important!
When adding scripts to lab repositories that other people may be working on (like Lab_shared_scripts), it is important to avoid conflicts: Make sure to pull the latest changes before you push to avoid conflicts!!!
For example:
git add myscript.pl
git commit -m "my new script"
git pull
git push origin master
If you are working on a commonly used script that other people might be working on check the latest commit before pulling to make sure you will not face merge conflicts.
