Schumer lab:Lab Meetings
Lab meeting/coffee hour schedule summer quarter 2022 (biweekly-ish schedule)
6/21 Lab meeting - Molly gives biannual lab climate survey report, followed by crafting
6/22 Coffee hour - Stepfanie gives practice plenary talk
6/28 Lab meeting - lab members give 5 minute research updates
6/22 Coffee hour - no coffee hour
7/5 Lab meeting - lab happy hour
7/6 Coffee hour - Molly hosts academic career chats/ ask me anything
7/12 Lab meeting - brief check in
7/13 Coffee hour - no coffee hour
7/19 Lab meeting - no lab meeting
7/20 Coffee hour - lab does sample ethanol change
8/2 Lab meeting - lab gives feedback on Shreya and Dan's paper on a 3-way hybrid zone
8/3 Coffee hour - TBD
8/16 Lab meeting - Anna Feller gives lab meeting
8/17 Coffee hour - lab gives feedback on Gabe's paper on a fixing the Xiphophorus phylogeny
9/2 Lab meeting - lab gives feedback on Tris's paper on lizard genome assemblies
9/6 Lab meeting - yearly lab-manual revision
9/7 Coffee hour - Ben Ruben gives coffee hour
9/13 Lab meeting - Roshni Patel gives lab meeting
9/14 Coffee hour - TBD
9/20 Lab meeting - TBD
9/21 Coffee hour - Carla Bautista gives coffee hour
Lab meeting/coffee hour schedule spring quarter 2022
3/29 Lab meeting - lab members discuss field trip, lab retreat, lab jobs
3/30 Coffee hour - no coffee hour
4/5 Lab meeting - Gabriel Birzu gives lab meeting on hybridization in bacteria
4/6 Coffee hour - Cheyenne leads discussion of Weiss et al. (2022) on melanoma in zebrafish
4/12 Lab meeting - no lab meeting
4/13 Coffee hour - Dan leads discussion of Stolle et al. (2022) on introgression of a colony structure supergene in ants
4/19 Lab meeting - lab gives feedback on Molly's NSF DEB proposal
4/20 Coffee hour - Gabe leads discussion of Cagan et al. (2022) on the relationship between mutation rates and lifespan in mammals
4/26 Lab meeting - no lab meeting
4/27 Coffee hour - Ken leads discussion of Bock et al. (2021) on hybridization in an invasive lizard
5/3 Lab meeting - lab members give 5 minute research updates
5/4 Coffee hour - Quinn leads discussion of Morrill et al. (2022) on ancestry-inclusive dog genomics
5/10 Lab meeting - lab discusses field trip plans
5/11 Lab retreat!
5/17 Lab meeting - lab discusses nanopore sequencing
5/18 Coffee hour - processing and reflection check in
5/24 Lab meeting - no lab meeting
5/25 Coffee hour - Stepfanie leads discussion of Weasel (2022) on race and evolutionary genomics.
5/31 Lab meeting - Alyssa Fortier gives lab meeting on balancing selection and primate MHCs
6/1 Coffee hour - Gabe's first year talk
6/6 Lab meeting - lab gives feedback on introgression primer draft
6/7 Lab meeting - Yuki Haba gives lab meeting
6/8 Coffee hour - Shreya gives practice Evolution talk
6/14 Lab meeting - lab gives feedback on Molly's NSF CAREER proposal
6/15 Coffee hour - Molly leads JC discussion
Lab meeting/coffee hour schedule winter quarter 2022
1/04 Lab meeting - lab members all give 5 minute research updates
1/07 Coffee hour - Ken brainstorms simulations
1/11 Lab meeting - Molly gives state of the lab update
1/14 Coffee hour - brainstorming & code debugging
1/18 Lab meeting - no lab meeting
1/21 Coffee hour - Ken leads discussion of Monroe et al. (2022) on mutation bias in Arabidopsis
1/25 Lab meeting - Wenhan Chang gives lab meeting on Drosophila gene evolution and hybrid incompatibilities
1/28 Coffee hour - Ombuds workshop
2/01 Lab meeting - Frank Chan gives lab meeting
2/04 Coffee hour - Leon Hilgers gives a talk
2/08 Lab meeting - Lab discusses climate in Eco-Evo field
2/11 Coffee hour - Lab reads SSE code of ethics proposal and provides feedback
2/15 Lab meeting - Lab gives 5 minute research updates, discuss upcoming fishroom inspection
2/18 Coffee hour - Andy and Tris lead discussion of Kolora et al. (2021) on genomics of Rockfish aging
2/22 Lab meeting - Arielle Fogel gives talk on baboon hybridization
2/25 Coffee hour - Bioinformatics coffee hour
3/01 Lab meeting - Marianna Karageorgi gives talk
3/04 Coffee hour - Lab gives feedback on Ben's mito paper revisions
Lab meeting/coffee hour schedule fall quarter 2021
9/21 Coffee hour - brainstorming & code debugging
9/22 Lab meeting - Dan gives a practice talk
9/28 Coffee hour - lab gives feedback on Shreya's NSF GRFP
9/29 Lab meeting - Gaston Jofre visits and discusses his swordtail hybrid zone research
10/05 Coffee hour - lab gives feedback on Tris's NSF GRFP
10/06 Lab meeting - no meeting
10/12 Coffee hour - lab gives feedback on Gabe's NSF GRFP
10/14 Lab meeting - lab gives feedback on Stepfanie's flicker hybrid zone manuscript
10/19 Coffee hour - discussion of lab & fish room jobs & organization
10/21 Lab meeting - Molly presents on a new hybrid incompatibility
10/26 Coffee hour - Dan leads discussion of Muralidhar et al.'s preprint on hybrid ancestry bundling
10/28 Lab meeting - lab members all give 5 minute research updates
11/02 Coffee hour - Cheyenne, Quinn, and Ben share wisdom on OAK/Sherlock/slurm
11/04 Lab meeting - lab gives feedback on Ken's stickleback hybrid fitness manuscript
11/09 Coffee hour - November Mexico trip planning
11/11 Lab meeting - Ethan Jewett from 23andMe presents
11/16 Coffee hour - brainstorming & code debugging
11/18 Lab meeting - Ken gives a practice talk
11/23 Coffee hour - lab reads Bernard Kim's recent Current Biology paper on Drosophila introgression
11/25 Lab meeting - Thanksgiving break [no lab meeting]
11/30 Coffee hour - Ben, Cheyenne, Dan, and Theresa give update on Mexico trip [great success!!!]
12/02 Lab meeting - Molly out of town [no lab meeting]
12/07 Coffee hour - lab members swap desks
12/09 Lab meeting - TBD
12/14 Coffee hour - Stepfanie gives a practice job talk
12/16 Lab meeting - lab members all give 5 minute research updates
Lab meeting Schedule Winter Quarter 2020
1/17 - General beginning of the quarter meeting/ state of the lab
1/24 - Molly at UCSC no lab meeting
1/31 - Ben lab meeting talk
2/7 - Quinn leads discussion of Palkopoulou et al. 2018 PNAS
2/14 - Nick Altemose visits the lab and gives lab meeting
2/21 - Quinn CEHG practice talk
2/28 - Molly at Hopkins no lab meeting
3/6 - [Grad student admissions]
3/13 - Sivan Yair visits the lab and gives lab meeting
3/20 - Alisa Sedghifar visits the lab and give lab meeting
3/27 -
Past lab meetings
9/20
Dani - intro to quartzy
Dani - zebrabase, waste tags
9/27
Molly - quick intro to available resources: box, sample inventory, wiki, slack
Go over fish & wet lab chores
Discuss upcoming inspection
10/4
Molly - Oak & depositing data, electronic lab notebooks
Bernard - SLiM
10/11
Cheyenne - short research update
10/18
Cheyenne - Sherlock
Discuss spotted caudal paper
10/25
Molly - AncestryHMM
Lab meeting computational topics
AncestryHMM
mixnmatch
github
SLiM
Journal Club Schedule
8/16 Dan Parallel introgression and selection on introduced alleles in a native species
8/9 Cheyenne - Adaptive introgression enables evolutionary rescue from extreme environmental pollution
Journal Club paper ideas
Hybridization:
Adaptive introgression underlies polymorphic seasonal camouflage in snowshoe hares
Neanderthal-Denisovan ancestors interbred with a distantly-related hominin
Adaptive introgression enables evolutionary rescue from extreme environmental pollution
On the distribution of tract lengths during adaptive introgression
Recombination:
Modulation of Prdm9-controlled meiotic chromosome asynapsis overrides hybrid sterility in mice