Raj Lab:Publications

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  1. Raj A and Tyagi S. Detection of individual endogenous RNA transcripts in situ using multiple singly labeled probes. Methods Enzymol. 2010;472:365-86. DOI:10.1016/S0076-6879(10)72004-8 | PubMed ID:20580972 | HubMed [raj-MIE-10]
  2. Raj A, Rifkin SA, Andersen E, and van Oudenaarden A. Variability in gene expression underlies incomplete penetrance. Nature. 2010 Feb 18;463(7283):913-8. DOI:10.1038/nature08781 | PubMed ID:20164922 | HubMed [raj-nature-10]
  3. Khalil AM, Guttman M, Huarte M, Garber M, Raj A, Rivea Morales D, Thomas K, Presser A, Bernstein BE, van Oudenaarden A, Regev A, Lander ES, and Rinn JL. Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression. Proc Natl Acad Sci U S A. 2009 Jul 14;106(28):11667-72. DOI:10.1073/pnas.0904715106 | PubMed ID:19571010 | HubMed [khalil-pnas-09]
  4. Raj A and van Oudenaarden A. Single-molecule approaches to stochastic gene expression. Annu Rev Biophys. 2009;38:255-70. DOI:10.1146/annurev.biophys.37.032807.125928 | PubMed ID:19416069 | HubMed [raj-annrev-09]
  5. Raj A and van Oudenaarden A. Nature, nurture, or chance: stochastic gene expression and its consequences. Cell. 2008 Oct 17;135(2):216-26. DOI:10.1016/j.cell.2008.09.050 | PubMed ID:18957198 | HubMed [raj-cell-08]
  6. Raj A, van den Bogaard P, Rifkin SA, van Oudenaarden A, and Tyagi S. Imaging individual mRNA molecules using multiple singly labeled probes. Nat Methods. 2008 Oct;5(10):877-9. DOI:10.1038/nmeth.1253 | PubMed ID:18806792 | HubMed [raj-natmeth-08]
  7. http://singlemoleculefish.com [singlemoleculefish]
  8. Maamar H, Raj A, and Dubnau D. Noise in gene expression determines cell fate in Bacillus subtilis. Science. 2007 Jul 27;317(5837):526-9. DOI:10.1126/science.1140818 | PubMed ID:17569828 | HubMed [maamar-science-07]
  9. Raj A, Peskin CS, Tranchina D, Vargas DY, and Tyagi S. Stochastic mRNA synthesis in mammalian cells. PLoS Biol. 2006 Oct;4(10):e309. DOI:10.1371/journal.pbio.0040309 | PubMed ID:17048983 | HubMed [raj-plos-06]
  10. Raj A and Peskin CS. The influence of chromosome flexibility on chromosome transport during anaphase A. Proc Natl Acad Sci U S A. 2006 Apr 4;103(14):5349-54. DOI:10.1073/pnas.0601215103 | PubMed ID:16567616 | HubMed [raj-pnas-06]
  11. Vargas DY, Raj A, Marras SA, Kramer FR, and Tyagi S. Mechanism of mRNA transport in the nucleus. Proc Natl Acad Sci U S A. 2005 Nov 22;102(47):17008-13. DOI:10.1073/pnas.0505580102 | PubMed ID:16284251 | HubMed [vargas-pnas-05]
All Medline abstracts: PubMed | HubMed