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Recent Publications

For most up to date list, see lab publications [1]

  1. Soyer OS, Kuwahara H, and Csikász-Nagy A. Regulating the total level of a signaling protein can vary its dynamics in a range from switch like ultrasensitivity to adaptive responses. FEBS J. 2009 Jun;276(12):3290-8. DOI:10.1111/j.1742-4658.2009.07054.x | PubMed ID:19438711 | HubMed [Paper1]
  2. Salathé M and Soyer OS. Parasites lead to evolution of robustness against gene loss in host signaling networks. Mol Syst Biol. 2008;4:202. DOI:10.1038/msb.2008.44 | PubMed ID:18628743 | HubMed [Paper2]
  3. Goldstein RA and Soyer OS. Evolution of taxis responses in virtual bacteria: non-adaptive dynamics. PLoS Comput Biol. 2008 May 23;4(5):e1000084. DOI:10.1371/journal.pcbi.1000084 | PubMed ID:18483577 | HubMed [Paper3]
  4. Csikász-Nagy A and Soyer OS. Adaptive dynamics with a single two-state protein. J R Soc Interface. 2008 Aug 6;5 Suppl 1(Suppl 1):S41-7. DOI:10.1098/rsif.2008.0099.focus | PubMed ID:18445552 | HubMed [Paper4]
  5. Soyer OS. Emergence and maintenance of functional modules in signaling pathways. BMC Evol Biol. 2007 Oct 31;7:205. DOI:10.1186/1471-2148-7-205 | PubMed ID:17974002 | HubMed [Paper5]
  6. Soyer OS and Bonhoeffer S. Evolution of complexity in signaling pathways. Proc Natl Acad Sci U S A. 2006 Oct 31;103(44):16337-42. DOI:10.1073/pnas.0604449103 | PubMed ID:17060629 | HubMed [Paper6]
  7. Soyer OS, Pfeiffer T, and Bonhoeffer S. Simulating the evolution of signal transduction pathways. J Theor Biol. 2006 Jul 21;241(2):223-32. DOI:10.1016/j.jtbi.2005.11.024 | PubMed ID:16403533 | HubMed [Paper7]
  8. Soyer OS, Salathé M, and Bonhoeffer S. Signal transduction networks: topology, response and biochemical processes. J Theor Biol. 2006 Jan 21;238(2):416-25. DOI:10.1016/j.jtbi.2005.05.030 | PubMed ID:16045939 | HubMed [Paper8]
  9. Pfeiffer T, Soyer OS, and Bonhoeffer S. The evolution of connectivity in metabolic networks. PLoS Biol. 2005 Jul;3(7):e228. DOI:10.1371/journal.pbio.0030228 | PubMed ID:16000019 | HubMed [Paper9]

All Medline abstracts: PubMed | HubMed

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