Moore Notes 7 23 14

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Group Call

  • Participants: Katie, Jonathan, Dongying, Stacia, Stephen, Josh, Sarah, Guillaume, Patrick, Krista
  • MMI event at Tech Museum on June 30 in San Jose
  • Stacia: JE's gender discrimination blog post
  • Krista Kernoedle (summer intern) slides
    • Strain level variation in B. vulgatus
    • Genomic islands
    • Horizontal transfer as well as deletions
    • Genes may be in different order in non-reference genomes
    • Sequence conservation of variable vs. core genes?
    • Try other B. vulgatus reference genomes
    • Are reads mapping from other species (false positives)?
    • Repeat on other species
  • Next week: shotmap