Moore GreenLabNotes1-20-09

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Steve K.:

1. GOS data set analysis. Srijak is running that on GOS, should be done in 2 weeks.

2. Super concatination. In AMPHORA paper, in tree show, that was based on this technique. Use this technique but add on metagenome pieces. Steve working on automated procedure for this technique in general. Next week can look at DeLong data set with individual genes (old way) plus super way (concatinated genes).

3. Simulation progress. Chatted with Sam. This week, plan to sit down, pick set of parameters for her project which starts with a reference alignment. Build trees.