Matt Gethers/Articles to Read/Technical 3

Technical 3

Genetic aspects of floral fragrance in plants

Scent engineering: toward the goal of controlling how flowers smell

Alternating Current Driven Electroluminescence from ZnSe/ZnS:Mn/ZnS Nanocrystals

Imaging Surface Charges of Individual Biomolecules

Synthetic Proton-Gated Ion Channels via Single Solid-State Nanochannels Modified with Responsive Polymer Brushes

The Charge Conduction Properties of a Parallel-Stranded DNA GQuadruplex: Implications for Chromosomal Oxidative Damage

Generalized model of the microwave auditory effect

Ordering of the Nanoscale Step Morphology As a Mechanism for Droplet Self-Propulsion

An externally tunable bacterial band-pass filter

Direct single-molecule observation of a protein living in two opposed native structures

Evidence of magnetic vortices formation in Mn-based sub-micrometre structures embedded in Si–Mn films

Oscillating magnetic field-actuated microvalves for micro- and nanofluidics

Intracellular Spatial Control of Fluorescent Magnetic Nanoparticles

Surface Phonon Polaritons Mediated Energy Transfer between Nanoscale Gaps

Rapid and Dynamic Intracellular Patterning of Cell-Internalized Magnetic Fluorescent Nanoparticles

Radiation-induced tetramer-to-dimer transition of Escherichia coli lactose repressor

Current bistability in a weakly coupled multi-quantum well structure: a magnetic field induced ‘memory effect’

Calculations of the resonant response of carbon nanotubes to binding of DNA

Spiral and target patterns in bivalve nacre manifest a natural excitable medium from layer growth of a biological liquid crystal

Excitable Media

Universal behavior of the osmotically compressed cell and its analogy to the colloidal glass transition

cDNA microarray reveals the alterations of cytoskeleton-related genes in osteoblast under high magneto-gravitational environment

Will planets reveal the light of their life?

Reaching the protein folding speed limit with large, sub-microsecond pressure jumps

Downhill protein folding under pressure

Slow down to speed up

Nanoelectromechanical systems: Mass spec goes nanomechanical

Ferroelectric memory: Slim fast

Droplet networks with incorporated protein diodes show collective properties

Towards single-molecule nanomechanical mass spectrometry

Locating the transition from periodic oscillations to spatiotemporal chaos in the wake of invasion

Traceless protein splicing utilizing evolved split inteins

Tentacled snakes turn C-starts to their advantage and predict future prey behavior

Programmed loss of millions of base pairs from a vertebrate genome

Mesoscopic atomic entanglement for precision measurements beyond the standard quantum limit

Propulsion of Gold Nanoparticles with Surface Plasmon Polaritons: Evidence of Enhanced Optical Force from Near-Field Coupling between Gold Particle and Gold Film

Click Chemistry and Bioorthogonal Reactions: Unprecedented Selectivity in the Labeling of Biological Molecules

Quantum engineering: Squeezing entanglement

Many-particle entanglement with Bose–Einstein condensates

Quantum mechanics: Entanglement goes mechanical

Thermoelectric Signatures of Coherent Transport in Single-Molecule Heterojunctions

Directed Hybridization and Melting of DNA Linkers using Counterion-Screened Electric Fields

1. Chen BS, Chang CH, and Lee HC. Robust synthetic biology design: stochastic game theory approach. Bioinformatics. 2009 Jul 15;25(14):1822-30. DOI:10.1093/bioinformatics/btp310 |
2. Cantone I, Marucci L, Iorio F, Ricci MA, Belcastro V, Bansal M, Santini S, di Bernardo M, di Bernardo D, and Cosma MP. A yeast synthetic network for in vivo assessment of reverse-engineering and modeling approaches. Cell. 2009 Apr 3;137(1):172-81. DOI:10.1016/j.cell.2009.01.055 |
3. Carrera J, Rodrigo G, and Jaramillo A. Model-based redesign of global transcription regulation. Nucleic Acids Res. 2009 Apr;37(5):e38. DOI:10.1093/nar/gkp022 |
4. Chen BS and Wu CH. A systematic design method for robust synthetic biology to satisfy design specifications. BMC Syst Biol. 2009 Jun 30;3:66. DOI:10.1186/1752-0509-3-66 |
5. Cournac A and Sepulchre JA. Simple molecular networks that respond optimally to time-periodic stimulation. BMC Syst Biol. 2009 Mar 3;3:29. DOI:10.1186/1752-0509-3-29 |
6. Desai TA, Rodionov DA, Gelfand MS, Alm EJ, and Rao CV. Engineering transcription factors with novel DNA-binding specificity using comparative genomics. Nucleic Acids Res. 2009 May;37(8):2493-503. DOI:10.1093/nar/gkp079 |
7. Endler L, Rodriguez N, Juty N, Chelliah V, Laibe C, Li C, and Le Novère N. Designing and encoding models for synthetic biology. J R Soc Interface. 2009 Aug 6;6 Suppl 4(Suppl 4):S405-17. DOI:10.1098/rsif.2009.0035.focus |
8. Gibson DG, Young L, Chuang RY, Venter JC, Hutchison CA 3rd, and Smith HO. Enzymatic assembly of DNA molecules up to several hundred kilobases. Nat Methods. 2009 May;6(5):343-5. DOI:10.1038/nmeth.1318 |
9. Haseloff J and Ajioka J. Synthetic biology: history, challenges and prospects. J R Soc Interface. 2009 Aug 6;6 Suppl 4(Suppl 4):S389-91. DOI:10.1098/rsif.2009.0176.focus |
10. Liu FH, Lin GH, Gao G, Qin BQ, Zhang JS, Zhao GP, Zhou ZH, and Shen JH. Bacterial and archaeal assemblages in sediments of a large shallow freshwater lake, Lake Taihu, as revealed by denaturing gradient gel electrophoresis. J Appl Microbiol. 2009 Mar;106(3):1022-32. DOI:10.1111/j.1365-2672.2008.04069.x |
11. Luisi PL. Chemical aspects of synthetic biology. Chem Biodivers. 2007 Apr;4(4):603-21. DOI:10.1002/cbdv.200790053 |
12. Matsuoka Y, Ghosh S, and Kitano H. Consistent design schematics for biological systems: standardization of representation in biological engineering. J R Soc Interface. 2009 Aug 6;6 Suppl 4(Suppl 4):S393-404. DOI:10.1098/rsif.2009.0046.focus |
13. Minhaz Ud-Dean SM. A theoretical model for template-free synthesis of long DNA sequence. Syst Synth Biol. 2008 Dec;2(3-4):67-73. DOI:10.1007/s11693-009-9023-x |
14. Pedersen M and Phillips A. Towards programming languages for genetic engineering of living cells. J R Soc Interface. 2009 Aug 6;6 Suppl 4(Suppl 4):S437-50. DOI:10.1098/rsif.2008.0516.focus |
15. Pereira de Souza T, Stano P, and Luisi PL. The minimal size of liposome-based model cells brings about a remarkably enhanced entrapment and protein synthesis. Chembiochem. 2009 Apr 17;10(6):1056-63. DOI:10.1002/cbic.200800810 |
16. Salis H, Tamsir A, and Voigt C. Engineering bacterial signals and sensors. Contrib Microbiol. 2009;16:194-225. DOI:10.1159/000219381 |
17. Weber W, Luzi S, Karlsson M, Sanchez-Bustamante CD, Frey U, Hierlemann A, and Fussenegger M. A synthetic mammalian electro-genetic transcription circuit. Nucleic Acids Res. 2009 Mar;37(4):e33. DOI:10.1093/nar/gkp014 |