Knight:Synthetic promoter design
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Notes on results of various synthetic promoter designs.
Sequences
Heterodimers:
-35 -10
Promoter1 cacgtgtgcgtgggTTGACAcgtgtgcgtgggaagtcGATACTgagcaca
Promoter2 TTGACAcgtgtgcgtgggaagtcGATACTtagattcacgtgtgcgtggg
Promoter3 cacgtgtgcgtgggTTGACAcgtgtgcgtgggaagtcGATACTtagattcacgtgtgcgtggg
Promoter4 cacgtgtgcgtgggTTGACAcacgtgtgcgtgggaatGATACTgagcaca
Promoter5 TTGACAcacgtgtgcgtgggaatGATACTtagattcacgtgtgcgtggg
Promoter6 cacgtgtgcgtgggTTGACAcacgtgtgcgtgggaatGATACTtagattcacgtgtgcgtggg
Homodimers:
-35 -10
BBa_R2000 agtttattcTTGACAtggtcccacgcgcgtggGATACTacgtcag
BBa_R2001 agtttattcTTGACAtggtcatattacggtgaGATACTcccacgcgcgtggg
BBa_R2002 agtttattcTTGACAtggtcccacgcgcgtggGATACTcccacgcgcgtggg
Promoter8 tttatcaaaaagagtgTTGACAtttttaagtcccacgcgTGGGATtagattcataaatttgagagaggagtt
Promoter10 tttatcaaaaagagtgTTGACAtttttaagctcccacgcgTGGGTtagattcataaatttgagagaggagtt
Promoter12 tttatcaaaaagagtgTTGACAtttttaatcccacgcgTGGGAATtagattcataaatttgagagaggagtt
Promoter9 tttatcaaaaagagtgTTGATCccacgcgtgggatatagGATACTtagattcataaatttgagagaggagtt
Promoter11 tttatcaaaaagagtgTTGACTCccacgcgtgggaatagGATACTtagattcataaatttgagagaggagtt
Promoter13 tttatcaaaaagagtgTTGTCccacgcgtgggactatagGATACTtagattcataaatttgagagaggagtt
Results
| Name | Synthesized (Issues) | Promotes (Strength) | Represses |
| Promoter1 | |||
| Promoter2 | |||
| Promoter3 | |||
| Promoter4 | |||
| Promoter5 | |||
| Promoter6 | |||
| Promoter7 | |||
| BBa_R2000 | |||
| BBa_R2001 | |||
| BBa_R2002 | |||
| Promoter8 | |||
| Promoter9 | |||
| Promoter10 | |||
| Promoter11 | |||
| Promoter12 | |||
| Promoter13 |
