Imperial College/Courses/Spring2008/Synthetic Biology/Resources/Literature
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General Reviews on Synthetic Biology
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- Endy D. Foundations for engineering biology. Nature. 2005 Nov 24;438(7067):449-53. DOI:10.1038/nature04342 |
- Andrianantoandro E, Basu S, Karig DK, and Weiss R. Synthetic biology: new engineering rules for an emerging discipline. Mol Syst Biol. 2006;2:2006.0028. DOI:10.1038/msb4100073 |
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Seminal Papers
- 'Cellular Gate Technology', 1998, Knight, Thomas F. Sussman, Gerald Jay
- 'A Standard Parts List for Biological Circuitry', 1999, Arkin, Adam Endy, Drew
- 'Cellular computation and communications using engineered genetic regulatory networks', 2001, Ron Weiss
- Elowitz MB and Leibler S. A synthetic oscillatory network of transcriptional regulators. Nature. 2000 Jan 20;403(6767):335-8. DOI:10.1038/35002125 |
- Gardner TS, Cantor CR, and Collins JJ. Construction of a genetic toggle switch in Escherichia coli. Nature. 2000 Jan 20;403(6767):339-42. DOI:10.1038/35002131 |
Foundational technologies / Standardisation effort
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- Czar MJ, Anderson JC, Bader JS, and Peccoud J. Gene synthesis demystified. Trends Biotechnol. 2009 Feb;27(2):63-72. DOI:10.1016/j.tibtech.2008.10.007 |
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Cool/Inspiring Synthetic Biology Projects
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- Chan LY, Kosuri S, and Endy D. Refactoring bacteriophage T7. Mol Syst Biol. 2005;1:2005.0018. DOI:10.1038/msb4100025 |
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- Anderson JC, Clarke EJ, Arkin AP, and Voigt CA. Environmentally controlled invasion of cancer cells by engineered bacteria. J Mol Biol. 2006 Jan 27;355(4):619-27. DOI:10.1016/j.jmb.2005.10.076 |
- Lu TK and Collins JJ. Dispersing biofilms with engineered enzymatic bacteriophage. Proc Natl Acad Sci U S A. 2007 Jul 3;104(27):11197-202. DOI:10.1073/pnas.0704624104 |
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Expression Chassis Related
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- Noireaux V, Bar-Ziv R, Godefroy J, Salman H, and Libchaber A. Toward an artificial cell based on gene expression in vesicles. Phys Biol. 2005 Sep 15;2(3):P1-8. DOI:10.1088/1478-3975/2/3/P01 |
- Noireaux V and Libchaber A. A vesicle bioreactor as a step toward an artificial cell assembly. Proc Natl Acad Sci U S A. 2004 Dec 21;101(51):17669-74. DOI:10.1073/pnas.0408236101 |
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DNA Assembly Related
- Idempotent Vector Design for Standard Assembly of Biobricks, Knight T. et al (2003)
- A New Biobrick Assembly Strategy Designed for Facile Protein Engineering, Phillips, Silver (2006)
Modelling Related
- Dynamics and Control of Synthetic Bio-molecular Networks (Del Vecchio and Sontag, 2007)
- Modular cell biology: retroactivity and insulation (Del Vecchio et al, 2007)
- An Introduction to Systems Biology (Uri Alon)
Synthetic Biology: Ethics and Impact on Society
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