IGEM:Peking University/2008/Related Papers

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AID related

  1. Chaudhuri, J., C. Khuong, and F.W. Alt, Replication protein A interacts with AID to promote deamination of somatic hypermutation targets. Nature, 2004. 430(7003): p. 992-8. PubMed
  2. Prochnow, C., et al., The APOBEC-2 crystal structure and functional implications for the deaminase AID. Nature, 2007. 445(7126): p. 447-51. PubMed
  3. Mayorov, V.I., et al., Expression of human AID in yeast induces mutations in context similar to the context of somatic hypermutation at G-C pairs in immunoglobulin genes. BMC Immunol, 2005. 6(1): p. 10. PubMed
  4. Kotani, A., et al., A target selection of somatic hypermutations is regulated similarly between T and B cells upon activation-induced cytidine deaminase expression. Proc Natl Acad Sci U S A, 2005. 102(12): p. 4506-11.PubMed
  5. Gomez-Gonzalez, B. and A. Aguilera, Activation-induced cytidine deaminase action is strongly stimulated by mutations of the THO complex. Proc Natl Acad Sci U S A, 2007. 104(20): p. 8409-14.PubMed
  6. Ito, S., et al., Activation-induced cytidine deaminase shuttles between nucleus and cytoplasm like apolipoprotein B mRNA editing catalytic polypeptide 1. Proc Natl Acad Sci U S A, 2004. 101(7): p. 1975-80PubMed
  7. Seki, M., P.J. Gearhart, and R.D. Wood, DNA polymerases and somatic hypermutation of immunoglobulin genes. EMBO Rep, 2005. 6(12): p. 1143-8.PubMed
  8. Neuberger, M.S., et al., Somatic hypermutation at A.T pairs: polymerase error versus dUTP incorporation. Nat Rev Immunol, 2005. 5(2): p. 171-8.PubMed

GAL4 related

  1. Marmorstein, R., et al., DNA recognition by GAL4: structure of a protein-DNA complex. Nature, 1992. 356(6368): p. 408-14. PubMed
  2. Ma, J. and M. Ptashne, Deletion analysis of GAL4 defines two transcriptional activating segments. Cell, 1987. 48(5): p. 847-53. PubMed
  3. Chasman, D.I. and R.D. Kornberg, GAL4 protein: purification, association with GAL80 protein, and conserved domain structure. Mol Cell Biol, 1990. 10(6): p. 2916-23. PubMed
  4. Gill, G. and M. Ptashne, Mutants of GAL4 protein altered in an activation function. Cell, 1987. 51(1): p. 121-6 PubMed
  5. Hidalgo, P., et al., Recruitment of the transcriptional machinery through GAL11P: structure and interactions of the GAL4 dimerization domain. Genes Dev, 2001. 15(8): p. 1007-20.PubMed

Yeast Manipulate

  1. Forsburg, S.L., S. pombe strain maintenance and media. Curr Protoc Mol Biol, 2003. Chapter 13: p. Unit 13 15.PubMed
  2. Bahler, J., et al., Heterologous modules for efficient and versatile PCR-based gene targeting in Schizosaccharomyces pombe. Yeast, 1998. 14(10): p. 943-51. PubMed
  3. Blackburn:Yeast Colony PCR