IGEM:Missouri University of Science and Technology/2009/Notebook/Cyanobacteria Mediated Filtration of Coal Flue/2014/05/29
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Date: 5/29/14 People in lab: Emily Puleo, Caleb TreccaziTitle: Checking plates from 5/28 Start Time: 11 am Purpose: Screen plates for correct colonies from 5/28 Protocol: Exceptions: Products:
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Results: No growth Notes: Possible problemw with resistance or something wrong with xgal or a problem with freezing PCR product before TOPO Stop Time: 11:15 am Next: Try PCR again without accidental freezing and plate on both xgal amp and just amp plates to test resistances
Date: 5/29/14 People in lab: Emily Puleo, Caleb Treccazi
Title: PCR of hmp to add prefix and suffix Start Time: 11:20 am Purpose: Amplify hmp with the iGEM prefix and suffix Protocol: LTM Ed. 2 PCR Exceptions: 7.5 uL template, 2.5 uL primers Products:
Sample Label | Description | Source Label | Quantity |
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PCR hmp 5/29 A | hmp with iGEM prefix and suffix | --- | 1 |
PCR hmp 5/29 B | hmp with prefix and suffix | --- | 1
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Results: Notes: Stop Time: 2 pm Next: Gel electrophoresis to check product
Date: 5/29/14 People in lab:Caleb Treccazi
Title: Gel Electrophoresis of PCR hmp 5/29 A and B Start Time: 2:05 pm Purpose: To check for successful products Protocol: LTM Ed. 2 Gels Exceptions: Products:
Well | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 |
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- | - | Ladder | - | PCR hmp 5/29 A | - | PCR hmp 5/29 B | - |
Products: Results: Notes: Used 90 mA for ~45 min Stop Time: 2:55 pm Next: TOPO
Date: 5/29/14 People in lab: Caleb Treccazi
Title: TOPO cloning of PCR hmp 5/29 A and B Start Time: 3:05 pm Purpose: To make copies of successful products Protocol: Invitrogen TOPO kit instruction manual Exceptions: Products:
Sample Label | Description | Source Label | Quantity |
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TOPO A 5/29 | hmp product cloned | PCR hmp 5/29 A | 1 |
TOPO B 5/29 | hmp product cloned | PCR hmp 5/29 B | 1
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Results: Notes: Cloned for ~ 9 min Stop Time: 3:15 pm Next: Chemical Transformations
Date: 5/29/14 People in lab: Caleb Treccazi
Title: Chemical Transformation of TOPO A and B 5/29 Start Time: 3:20 pm Purpose: To grow and screen cells with hmp with the prefix and suffix Protocol: LTM Ed. 2 Exceptions: Products:
Sample Label | Description | Source Label | Quantity |
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CT 1 5/29 | 20 uL CT cells on amp xgal plate | TOPO A 5/29 | 1 |
CT 2 5/29 | 200 uL CT cells on amp xgal plate | TOPO A 5/29 | 1 |
CT 3 5/29 | 20 uL CT cells on amp xgal plate | TOPO B 5/29 | 1 |
CT 4 5/29 | 200 uL CT cells on amp xgal plate | TOPO B 5/29 | 1 |
CT 5 5/29 | 20 uL CT cells on amp plate | TOPO B 5/29 | 1 |
CT 6 5/29 | 200 uL CT cells on amp plate | TOPO B 5/29 | 1 |
Results: CT 5 was discarded as contaminated after lawn growth, plates with colonies were saved from CT 1 - CT 4 for screening Notes: Amp plates were unmarked or badly marked in the fridge but were assumed to be amp and usable. Stop Time: 6:10 pm Next: Save plates for isolations
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