IGEM:IMPERIAL/Methodology/Part documentation template/Modelling
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| Super Parts | links to higher level parts if applicable | |
|---|---|---|
| Actual Part | Logo of the Part | |
| Sub Parts | link to included part if applicable | link to included part if applicable |
Model assumptions and relevance
- bullet point style
Model description
- define your model using a mathematical description
- insert a graphical representation if possible (e.g. CellDesigner display)
- link to SBML file or matlab.
Model variables and parameters
(list all the variables and parameters of the model in a table, specifying if their values are known, unknown, to be measured.)
| Variables | ||||
| Name | Description | Initial Value | Confidence | Reference |
|---|---|---|---|---|
| Variable 1 | bla bla bla | XXX | known/unknown/to be measured | links |
| Variable 2 | bla bla bla | XXX | known/unknown/to be measured | links |
| Variable 3 | bla bla bla | XXX | known/unknown/to be measured | links |
| Parameters | ||||
| Name | Description | Value | Confidence | Reference |
|---|---|---|---|---|
| Parameter 1 | bla bla bla | XXX | known/unknown/to be measured | links |
| Parameter 2 | bla bla bla | XXX | known/unknown/to be measured | links |
| Parameter 3 | bla bla bla | XXX | known/unknown/to be measured | links |
Dynamical and sensitivity analysis
- analyze model in order to show how the part could fulfill its specifications
- insert graph and charts
Characterization
- Describe how you plan to use the modelling to characterize the part
