PCR/Agarose Gel Electrophoresis
- PCR: Candidate cell lines (3 primers + 1 error = 4)
Reagent
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Vol
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Mix* (x #)
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Expected: 1. 4-x, P1 = 1145 2. 4-x, P3 = 1046 3. 4-x, P6 = 1139 4. 6-x, P1 = 1146 5. 6-x, P3 = 1046 6. 6-x, P6 = 1146
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![Hover name](https://s3-us-west-2.amazonaws.com/oww-files-thumb/f/f9/2016-06-23_6-1_through_6-6.jpg/300px-2016-06-23_6-1_through_6-6.jpg)
![Hover name](https://s3-us-west-2.amazonaws.com/oww-files-thumb/4/45/2016-06-23_4-1_through_4-9_no_4-4_or_4-5.jpg/300px-2016-06-23_4-1_through_4-9_no_4-4_or_4-5.jpg) 5 μL/lane; 1% agarose; Ladder
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genomic OR plasmid DNA |
1.0 / 0.5 |
4.0 / 2.0
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10 μM forward primer |
1.0 |
---
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10 μM reverse primer |
1.0 |
---
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2x GoTaq green |
10.0 |
40.0
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dH2O |
7.0 / 7.5 |
28.0 / 30
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20.0 μL |
72.0 μL
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Note: *Prep one Mix per template
- For each template, aliquot 18.0 master mix into 3 tubes
Thermal cycler: Labnet - GOTAQ
- 95°C 3 min.
- 30x[95°C, 30 sec; 57°C 30 sec; 72°C 30 sec]
- 72°C 3 min.
- 4°C, ∞
- Conclusions
- Top image, top row, 6-1, 6-2, 6-3, P1, 3, and 6 for each.
- Top image, bottom row, 6-4, 6-5, 6-6, P1, 3, and 6 for each.
- Bottom image, top row, 4-1, 4-2, 4-3, P1, 3, and 6 for each.
- Bottom image, bottom row, 4-4, 4-7, 4-9, P1, 3, and 6 for each.
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