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Wilding, C., Smith, I., Lynd, A., Yawson, A. E., Weetman, D., Paine, M. and Donnelly, M. J. (2012) 'A cis-regulatory sequence driving metabolic insecticide resistance in mosquitoes: Functional characterisation and signatures of selection'. Insect Biochemistry and Molecular Biology, Vol 42, Issue 9, pp. 699-707.

Jones, C., Liyanapathirana, M., Agossa, F. R., Weetman, D., Ranson, H, Donnelly, M. J. and Wilding, C. (2012) 'Footprints of positive selection associated with a mutation (N1575Y) in the voltage-gated sodium channel of Anopheles gambiae'. Proceedings of the National Academy of Sciences, Vol 109, Issue 17, pp. 6614-6619.

Mitchell, S. N., Stevenson, B. J., Muller, P., Wilding, C. S., Egyir-Yawson, A., Field, S. G., Hemingway, Janet, Paine, M. J. I., Ranson, H. and Donnelly, M. J. (2012) 'Identification and validation of a gene causing cross-resistance between insecticide classes in Anopheles gambiae from Ghana'. Proceedings of the National Academy of Sciences, Vol 109, Issue 16, pp. 6147-6152.

Yeka, A., Gasasira, A., Mpimbaza, A., Achan, J., Nankabirwa, J., Nsobya, S., Staedke, S. G., Donnelly, M. J., Wabwire-Mangen, F., Talisuna, A., Dorsey, G., Kamya, M. R. and Rosenthal, P. J. (2012) 'Malaria in Uganda: Challenges to control on the long road to elimination'. Acta Tropica, Vol 121, Issue 3, pp. 184-195


Weetman, D., Wilding, C.S., Steen, K., Pinto, J., and Donnelly, M.J. (2011) Gene flow–dependent genomic divergence between Anopheles gambiae M and S forms. Molecular Biology and Evolution, Vol 29, Issue 1, pp. 279-291 Abstract

Ayres, C.F.J., Müller, P., Dyer, N.A., Wilding, C.S., Rigden, D.J. and Donnelly, M.J. (2011) Comparative genomics of the anopheline glutathione S-transferase epsilon cluster. PLoS One (in press)

Dyer, N.A., Ravel, S., Choi, K-S., Darby, A., Causse, S., Kapitano, B., Hall, M.J.R., Steen, K., Latumba, P., Madinga, J., Torr, S., Okedi, L.M., Lehane, M.J. and Donnelly M.J. (2011) Cryptic diversity within the major trypanosomiasis vector Glossina fuscipes revealed by molecular markers. PLoS Neglected Tropical Diseases 5, e1266 PDF


Weetman, D., Wilding, C.S., Steen, K., Morgan, J.C., Simard, F. and Donnelly, M.J. (2010) Association mapping of insecticide resistance in wild Anopheles gambiae populations: major variants identified in a low-linkage disequilbrium genome. PLoS One 5, e13140 PDF

Klinkenberg, E., Onwona-Agyeman, K.A., McCall, P.J., Wilson, M.D., Bates, I., Verhoeff, F.H., Barnish, G. and Donnelly, M.J. (2010) Cohort study on malaria, anaemia and nutrition shows marked mass effect at low ITN coverage in urban Accra, Ghana. Transactions of the Royal Society of Tropical Medicine and Hygiene 104, 496-503 PDF

Solano, P., Kaba D., Ravel S., Dyer N.A., Sall B., Vreysen M.J.B, Seck M.T., Darbyshir H., Gardes L., Donnelly M.J., De Meeûs T. and Bouyer J. (2010) Population genetics as a tool to select tsetse control strategies: suppression or eradication of Glossina palpalis gambiensis in the niayes of Senegal. PLoS Neglected Tropical Diseases 4, e692

Lynd, A., Weetman, D., Barbosa, S., Yawson, A.E., Mitchell, S., Pinto, J., Hastings, I. and Donnelly, M.J. (2010) Field, genetic and modelling approaches show strong positive selection acting upon an insecticide resistance mutation in Anopheles gambiae s.s. Molecular Biology and Evolution 27, 1117–1125 PDF


Gomes, B., Novo, M.T., Sousa, C.A., Freitas, B.F., Alves, R., Salgueiro, P., Donnelly, M.J., Almeida, A.P.G. and Pinto, J. (2009) Asymmetric introgression between sympatric molestus and pipiens forms of Culex pipiens (Diptera: Culicidae) from southern Portugal. BMC Evolutionary Biology 9, e262

Wilding, C.S., Weetman, D., Steen, K., and Donnelly, M.J. (2009) High, clustered, nucleotide diversity in the genome of Anopheles gambiae revealed by SNP discovery through pooled-template sequencing: implications for high-throughput genotyping protocols. BMC Genomics 10, e320 PDF

Dyer, N. A., Furtado, A., Cano, J., Ferreira, F., Odete-Afonso, M., Ndong-Mabale, N., Ndong-Asumu, P., Centeno-Lima, S., Benito, A., Weetman, D., Donnelly, M.J. and Pinto, J. (2009) Evidence for a discrete evolutionary lineage within Equatorial Guinea suggests that the tsetse fly Glossina palpalis palpalis exists as a species complex. Molecular Ecology 18, 3268–3282 PDF

Wilding, C.S., Weetman, D., Steen, K., and Donnelly, M.J. (2009) Accurate determination of DNA yield from individual mosquitoes for population genomic applications. Insect Science 16, 361-363 PDF

Donnelly, M.J., Corbel, V., Weetman, D., Wilding, C.S., Williamson, M.S. and Black, W.C. IV (2009) Does kdr-genotype predict insecticide-resistance phenotype in mosquitoes? Trends in Parasitology 25, 213-219 PDF Data

Ramphul, U., Boase, T., Bass, C., Okedi, L.M., Donnelly, M.J. and Müller, P. (2009) Insecticide resistance and its association with target-site mutations in natural populations of Anopheles gambiae from eastern Uganda. Transactions of the Royal Society of Tropical Medicine and Hygiene 103, 1121-1126 PDF

Paredes-Esquivel, C., Donnelly, M.J., and Harbach, R.E. and Townson, H. (2009) A molecular phylogeny of mosquitoes in the Anopheles barbirostris Subgroup reveals cryptic species: implications for identification of disease vectors. Molecular Phylogenetics and Evolution 50, 141-151

Solano, P., Ravel, S., Bouyer, J., Camara, M., Kagbadouno, M.S., Dyer, N., Gardes, L., Donnelly, M.J. and De Meeûs, T. (2009) The population structure of Glossina palpalis gambiensis from island and continental locations in coastal Guinea. PLoS Neglected Tropical Diseases 3, e392


Müller, P., Warr, E., Stevenson, B.J., Pignatelli, P.M., Morgan, J.C., Steven, A., Yawson, A.E., Mitchell, S.N., Hemingway, J., Ranson, H., Paine, M.J.I., and Donnelly, M.J.(2008) Field-caught permethrin-resistant Anopheles gambiae over-express a cytochrome P450 that metabolizes pyrethroids. PLoS Genetics 4, e1000286 PDF

Marshall, J.C., Pinto, J., Charlwood, J.D., Gentile G., Santolamazza, F., Simard F., della Torre, A., Donnelly, M.J. and Caccone, A. (2008) Exploring the origin and degree of genetic isolation of the populations of Anopheles gambiae s.s. from the islands of São Tomé and Príncipe: implications for testing transgenic-based vector control strategies. Evolutionary Applications 1, 631-644 PDF

Dyer, N.A., Lawton, S.P., Ravel, S., Choi, K.S., Lehane, M.J., Robinson, A., Okedi, L., Hall, M., Solano, P.S. and Donnelly, M. J. (2008) Molecular phylogenetics of tsetse flies (Diptera: Glossina) based on mitochondrial (CO1, 16S, ND2) and nuclear ribosomal DNA sequences. Molecular Phylogenetics and Evolution 49, 227-239 PDF

Black W. C. IV, Gorrochetequi-Escalante N. Randle N.P. and Donnelly M.J. (2008) The Yin and Yang of Linkage Disequilibrium: Association Mapping of Genes Conferring Insecticide Resistance in Insect Vectors of Disease. Advances in Experimental Medicine and Biology 627, 71-83 PDF

Brown, J.E., Komatsu, K.J., Abila, P.P., Robinson, A.S., Okedi L.M. A., Dyer, N., Donnelly, M.J., Slotman, M.A., and Caccone A. (2008) Polymorphic microsatellite markers for the tsetse fly Glossina fuscipes fuscipes (Diptera: Glossinidae), a vector of Human African Trypanosomiasis. Molecular Ecology Resources 8, 1506-1508

Santolamazza, F., Calzetta, M., Etang, J., Barrese, E., Dia, I., Caccone, A., Donnelly, M.J., Petrarca, V., Simard, F., Pinto, J., and della Torre, A. (2008) Distribution of knock-down resistance mutations in Anopheles gambiae (Diptera: culicidae) molecular forms in West and Central-West Africa. Malaria Journal 7, e74

Mzilahowa, T., Ball, A.J., Bass, C., Morgan, J.C., Nyoni, B., Steen, K., Donnelly, M.J. and Wilding, C.S. (2008) Reduced susceptibility to DDT in field populations of Anopheles quadriannulatus and An. arabiensis: evidence for larval selection. Medical and Veterinary Entomology 22, 258-263 PDF

Esnault, C., Boulesteix, M., Duchemin, J.B., Koffi, A., Chandre,F., Dabire,R., Robert, V., Simard, F., Tripet, F., Donnelly, M.J., Fontenille, D., and Biémont, C. (2008) High genetic differentiation between the M and S molecular forms of Anopheles gambiae in Africa. PLoS One 3, e1968

Klinkenberg, E., McCall, P.J., Wilson, M.D., Amerasinghe, F.P. and Donnelly M.J. (2008) Impact of urban agriculture on malaria vectors in Accra, Ghana. Malaria Journal 7, e151 PDF

Müller, P., Chouaïbou, M., Pignatelli, P., Etang, J., Walker E.D., Donnelly, M.J. Simard, F. and Ranson, H. (2008) Pyrethroid tolerance is associated with elevated expression of antioxidants and agricultural practice in Anopheles arabiensis sampled from an area of cotton fields in Northern Cameroon. Molecular Ecology 17, 1145-1155 PDF

Pinto, J., Lynd, A., Vicente, J.L., Santolamazza F., Randle, N.P., Caccone, A., Gentile, G., Moreno, M., Simard, F., Charlwood, J.D., do Rosário, V.E., della Torre, A. and Donnelly, M.J. (2007) Origins and distribution of knockdown resistance mutations in the afrotropical mosquito vector Anopheles gambiae. PLoS One 2, e1243 PDF

Bass, C., Williamson, M.S., Wilding, C.S., Donnelly, M.J. and Field, L.M. Identification of the main malaria vectors in the Anopheles gambiae species complex using a TaqMan real-time PCR assay. Malaria Journal 6, e155

Saavedra-Rodriguez, K., Urdaneta, L., Rajatileka, S., Moulton, M., Flores, A.E., Fernandez-Salas, I., Bisset, J., Rodriguez, M., McCall, P.J., Donnelly, M.J., Ranson, H., Hemingway, J., and Black, W.C. IV (2007) Mutations in the voltage gated sodium channel gene of Latin American Aedes aegypti detected with allele specific polymerase chain reactions. Insect Molecular Biology 16, 785-798

Himeidan, Y.E., Chen, H., Chandre, F. Donnelly, M.J. and Yan, G. (2007) Short report: Permethrin and DDT resistance in the malaria vector Anopheles arabiensis from eastern Sudan. American Journal of Tropical Medicine and Hygiene 77, 1066-1068

Bass, C., Nikou, D., Donnelly, M.J., Williamson, M.S., Ranson, H., Ball, A.J., Vontas, J. and Field, L.M. (2007) Detection of knockdown resistance (kdr) mutations in Anopheles gambiae: a comparison of two new high-throughput assays with existing methods. Malaria Journal, 6, e111

Ali, N., Hume, J.C.C., Dadzie, S.K. and Donnelly, M.J. (2007) Molecular genetic studies of Anopheles stephensi in Pakistan. Medical and Veterinary Entomology 21, 265-269

Müller, P., Donnelly M.J. and Ranson, H. (2007) Transcription profiling of a recently colonised pyrethroid resistant Anopheles gambiae strain from Ghana. BMC Genomics, 8, 36 PDF

Yawson, A.E., Weetman D., Wilson, M.D. and Donnelly, M.J. (2007) Ecological zones rather than molecular forms predict genetic differentiation in the malaria vector Anopheles gambiae s.s. in Ghana. Genetics, 175, (2) PDF


Ronald, L.A., Kenny, S.L., Klinkenberg, E., Akoto, A.O., Boakye, I., Barnish, G., and Donnelly, M.J. (2006) Malaria and anaemia among children in two communities of Kumasi, Ghana: a cross-sectional survey Malaria Journal, 5, 105 PDF

Donnelly, M.J. (2006) Bloodthirsty amazons? Heredity, 96, 421

Pinto, J., Lynd, A., Elissa, N., Donnelly, M.J., Costa, C., Gentile, G., Caccone, A., and do Rosário, V.E. (2006) Co-occurrence of East and West African kdr mutations suggests high levels of resistance to pyrethroid insecticides in Anopheles gambiae from Libreville, Gabon. Medical and Veterinary Entomology, 20, 27-32 PDF

Klinkenberg, E., McCall, P.J., Wilson, M.D., Akoto, A.O., Amerasinghe, F.P., Bates, I. Verhoeff, F.H., Barnish G. and Donnelly M.J. (2006) Urban malaria and anaemia in children: a cross-sectional survey in two cities of Ghana. Tropical Medicine and International Health, 11, (5), 578-588 PDF

Klinkenberg, E., McCall, P.J., Hastings, I. M., Wilson, M. D., Amerasinghe, F. P. and Donnelly M. J. (2005) High malaria prevalence and urban agriculture in Accra, Ghana Emerging Infectious Diseases, 11, 8, 1290-1293 PDF

Lynd A., Ranson, H., McCall P.J., Randle N.P., Black W.B. IV, Walker E.D. and Donnelly M.J. (2005) A simplified, high-throughput method for pyrethroid knock-down resistance (kdr) detection in Anopheles gambiae. Malaria Journal, 4, 16 (14 March 2005) PDF

Hastings, I.M. and Donnelly M.J. (2005) The costs of antimalarial drug resistance and their impact on the evolution of resistance. Drug Resistance Updates, 8, 43-50 PDF

Donnelly M.J. , McCall P.J., Lengeler C., Bates I., D'Alessandro U. Barnish G., Konradsen F., Klinkenberg E., Townson H., Trape J-F., Hastings I.M., and Mutero C. (2005) Malaria and urbanisation in sub-Saharan Africa. Malaria Journal, 4, 12 (18 Feb 2005) PDF

Yawson, A.E., McCall, P.J., Wilson, M.D. and Donnelly, M.J. (2004) Species abundance and insecticide resistance of Anopheles gambiae in selected areas of Ghana and Burkina Faso. Medical and Veterinary Entomology 18, 372-377.PDF

Monteiro,F.A., Donnelly, M.J., Beard, C.B. and Costa, J. (2004) Nested Clade and Phylogeographic Analyses of the Chagas Disease Vector Triatoma brasiliensis in Northeast Brazil Molecular Phylogeny and Evolution, 32, 46-56 PDF

Donnelly, M.J., Pinto, J., Girod R., Besansky N.J. and Lehmann T. (2004) Revisiting the role of introgression vs. shared ancestral polymorphisms as key processes shaping genetic diversity in the recently separated sibling species of the Anopheles gambiae complex. Heredity, 92, 61-68 PDF


Pinto J., Donnelly M.J., Malta-Vacas J., Sousa C.A., Gil V., Ferreira C., Petrarca V., do Rosário V.E. and Charlwood J.D. (2003) An island within an island: genetic differentiation of Anopheles gambiae in São Tomé, West Africa, and its relevance to malaria vector control. Heredity, 91, 407-414 PDF

Merelo-Lobo A.R., McCall P.J., Perez M.A., Spiers A.A., Mzilahowa T., Ngwira B., Molyneux D.H. and Donnelly M.J. (2003) Identification of the vectors of lymphatic filariasis in the Lower Shire Valley, southern Malawi. Transactions of the Royal Society of Tropical Medicine and Hygiene, 97, 1-3 PDF

Verardi A, Donnelly M.J., Rowland M, and Townson H. (2002) Isolation and characterisation of microsatellite loci in the mosquito Anopheles stephensi Liston (Diptera: Culicidae). Molecular Ecology Notes, 2, 488-490.

Pinto J., Donnelly M.J., Sousa C.A., Gil V., Ferreira C., Elissa N., do Rosário V.E. and Charlwood J.D. (2002) Genetic structure of Anopheles gambiae (Diptera: Culicidae) in São Tomé and Príncipe (West Africa): implications for malaria control Molecular Ecology, 11, 2183-2187. PDF

Donnelly M.J., Simard F. and Lehmann T. (2002) Evolutionary studies of malaria vectors. Trends in Parasitology 18, 75-80. PDF

Donnelly M.J., Licht, M.C. and Lehmann T.(2001) Evidence for recent population expansion in the evolutionary history of the malaria vectors Anopheles arabiensis and Anopheles gambiae. Molecular Biology and Evolution 18, 1353-1364. PDF

Charlwood J.D., Qassim M., Elsnur E.I.., Donnelly M., Petrarca V., Billingsley P.F., Pinto J. and Smith T.(2001) The impact of indoor residual spraying with Malathion on malaria transmission in refugee camps in eastern Sudan. Acta Tropica 80, 1-8. PDF

Donnelly M.J. and Townson H. (2000) Evidence for extensive genetic differentiation among populations of the malaria vector Anopheles arabiensis in eastern Africa. Insect Molecular Biology. 9, 357-367. PDF

Langworthy N., Renz A., Meckenstedt U., Henkle-Dührsen K., Bronsvoort M., Tanya V., Donnelly M.J. and Trees A. (2000) Macrofilaricidal activity of tetracycline against the filarial nematode, Onchocerca ochengi: elimination of Wolbachia precedes worm death and suggests a dependent relationship. Proceedings of the Royal Society series B. 267, 1063-1069.

Donnelly M.J., Cuamba N., Charlwood J.D., Collins F.H. and Townson H. (1999) Population structure in the malaria vector, Anopheles arabiensis Patton, in East Africa. Heredity. 83, 408-417. PDF

Donnelly M.J., Konradsen F. and Birley M.H. (1997) Malaria-treatment-seeking behaviour in the southern Punjab, Pakistan. Annals of Tropical Medicine and Parasitology. 91, 665-667.PDF