Cfrench:hemlist1
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Genera of bacteria and archaea with hemerythrin-like genes
Based on searches performed during November 2006.
Genus | family | order | class/phylum | number of hemerythrins |
---|---|---|---|---|
Acidobacteria sp. | Acidobacteriaeae | Acidobacteriales | Acidobacteria | 4 |
Acidovorax | Comamonadaceae | Burkholderiales | Betaproteobacteria | 1,3 |
Aeromonas | Aeromonadaceae | Aeromonadales | Gammaproteobacteria | 2 |
Alcanivorax | Alcanivoraceae | Oceanospirillales | Gammaproteobacteria | 1 |
Alkalilimnicola | Ectothiorhodospiraceae | Chromatiales | Gammaproteobacteria | 2 |
Anaeromyxobacter | Myxococcaceae | Myxococcales | Deltaproteobacteria | 8 |
Aquifex | Aquificaceae | Aquificales | Aquificae | 1 |
Azotobacter | Pseudomonadaceae | Pseudomonadales | Gammaproteobacteria | 1 |
Bdellovibrio | Bdellovibrionaceae | Bdellovibrionales | Deltaproteobacteria | 1 |
Bordetella | Alcaligenaceae | Burkholderiales | Betaproteobacteria | 1 |
Burkholderia | Burkholderiaceae | Burkholderiales | Betaproteobacteria | 23 strains 1 each, 1 strain has 3 |
Campylobacter | Campylobacteraceae | Campylobacterales | Epsilonproteobacteria | 7, 2, 6, 3, 5, 5, 5, 5, 3, 2, 2, 5 |
Caldocellulosiruptor | Syntrophomonadaceae | Clostridiales | Clostridia, Firmicutes | 1 |
Clostridium | Clostridicaeae | Clostridiales | Clostridia, Firmicutes | 1, 6, 5, 1, 2 |
Colwellia | Colwelliaceae | Alteromonadales | Gammaproteobacteria | 7 |
Comamonas | Comamonadaceae | Burkholderiales | Betaproteobacteria | 4 |
Dechloromonas | Rhodocyclaceae | Rhodocyclales | Betaproteobacteria | 10 |
Desulfitobacterium | Peptococcaceae | Clostridiales | Clostridia, Firmicutes | 2, 2 |
Desulfotalea | Desulfobulbaceae | Desulfobacterales | Deltaproteobacteria | 3 |
Desulfovibrio | Desulfovibrionaceae | Desulfovibrionales | Deltaproteobacteria | 3, 4, 4 |
Desulfuromonas | Desulfuromonadaceae | Desulfuromonadales | Deltaproteobacteria | 10 |
Leuwenhoekiella | Flavobacteriaceae | Flavobacteriales | Flavobacteria, Bacteroidetes | 1 |
Geobacter | Geobacteraceae | Desulfuromonadales | Deltaproteobacteria | 2, 2, 2, 5 |
Haloarcula | Halobacteriaceae | Halobacteriales | Halobacteria, Euryarchaeota | 1 |
Halorhodospira | Ectothiorhodospiraceae | Chromatiales | Gammaproteobacteria | 1 |
Helicobacter | Helicobacteraceae | Campylobacterales | Epsilonproteobacteria | 2 |
Hydrogenobacter | Aquificaceae | Aquificales | Aquificae | 1 |
Idiomarina | Idiomarinaceae | Alteromonadales | Gammaproteobacteria | 1, 1 |
Janthinobacterium | Oxalobacteraceae | Burkholderiales | Betaproteobacteria | 1 or 2 |
Kuenenia | Planctomycetales | Planctomycetes | 2 | |
Magnetococcus | Proteobacteria | 14 to 19 | ||
Magnetospirillum | Rhodospirillaceae | Rhodospirillales | Alphaproteobacteria | approx 29, 29 |
Mariprofundus | Proteobacteria | 1 | ||
Mesorhizobium | Phyllobacteriaceae | Rhizobiales | Alphaproteobacteria | 1 |
Methanocaldococcus | Methanocaldococcaceae | Methanococcales | Methanococci, Euryarchaeota | 1 |
Methanospirillum | Methanospirillaceae | Methanomicrobiales | Methanomicrobia, Euryarchaeota | 2 |
Methylococcus | Methylococcaceae | Methylococcales | Gammaproteobacteria | 1 |
MLMS1 | Deltaprotebacteria | 5? | ||
Oceanospirillum | Oceanospirillales | Gammaproteobacteria | 3 | |
Pelobacter | Pelobacteraceae | Desulfuromonadales | Deltaproteobacteria | 3, 1 |
Polaromonas | Comamonadaceae | Burkholderiales | Betaproteobacteria | 3 |
Pseudomonas | Pseudomonadaceae | Pseudomonadales | Gammaproteobacteria | 8 strains, 1 each |
Ralstonia | Burkholderiaceae | Burkholderiales | Betaproteobacteria | 2, 2, 1 |
Reinekea | Gammaproteobacteria | 2 | ||
Rhodoferax | Comamonadaceae | Burkholderiales | Betaproteobacteria | 2,2 |
Rhodopseudomonas | Bradyrhizobiaceae | Rhizobiales | Alphaproteobacteria | 1, 1, 1 |
Rhodospirillum | Rhodospirillaceae | Rhodospirillales | Alphaproteobacteria | 6 |
Shewanella | Shewanellaceae | Alteromonadales | Gammaproteobacteria | 11 strains, 1 each |
Solibacter | Solibacteraceae | Solibacterales | Solibacteres, Acidobacteria | 3 |
Symbiobacterium | Actinobacteria | 1 | ||
Syntrophomonas | Syntrophomonadaceae | Clostridiales | Clostridia, Firmicutes | 1 |
Thermoanaerobacter | Thermoanaerobacteriaceae | Thermoanaerobacteriales | Clostridia, Firmicutes | 1 |
Thermosynechococcus | Chroococcales | Cyanobacteria | 2 | |
Thiomicrospira | Helicobacteraceae | Campylobacterales | Epsilonproteobacteria | 1 |
Verminephrobacter | Comamonadaceae | Burkholderiales | Betaproteobacteria | 1 |
Vibrio | Vibrionaceae | Vibrionales | Gammaproteobacteria | 8 strains, 1 each |
Wolinella | Helicobacteraceae | Campylobacterales | Epsilonproteobacteria | 1 |
Xanthomonas | Xanthomonadaceae | Xanthomonadales | Gammaproteobacteria | 1, 1, 1, 1 |
List ordered taxonomically
Genus | family | order | class/phylum | number of hemerythrins |
---|---|---|---|---|
Acidobacteria sp. | Acidobacteriaeae | Acidobacteriales | Acidobacteria | 4 |
Solibacter | Solibacteraceae | Solibacterales | Solibacteres, Acidobacteria | 3 |
Aquifex | Aquificaceae | Aquificales | Aquificae | 1 |
Hydrogenobacter | Aquificaceae | Aquificales | Aquificae | 1 |
Rhodopseudomonas | Bradyrhizobiaceae | Rhizobiales | Alphaproteobacteria | 1, 1, 1 |
Mesorhizobium | Phyllobacteriaceae | Rhizobiales | Alphaproteobacteria | 1 |
Magnetospirillum | Rhodospirillaceae | Rhodospirillales | Alphaproteobacteria | approx 29, 29 |
Rhodospirillum | Rhodospirillaceae | Rhodospirillales | Alphaproteobacteria | 6 |
Magnetococcus | Alphaproteobacteria | 14 to 19 | ||
Bordetella | Alcaligenaceae | Burkholderiales | Betaproteobacteria | 1 |
Burkholderia | Burkholderiaceae | Burkholderiales | Betaproteobacteria | 23 strains 1 each, 1 strain has 3 |
Ralstonia | Burkholderiaceae | Burkholderiales | Betaproteobacteria | 2, 2, 1 |
Acidovorax | Comamonadaceae | Burkholderiales | Betaproteobacteria | 1,3 |
Comamonas | Comamonadaceae | Burkholderiales | Betaproteobacteria | 4 |
Polaromonas | Comamonadaceae | Burkholderiales | Betaproteobacteria | 3 |
Rhodoferax | Comamonadaceae | Burkholderiales | Betaproteobacteria | 2,2 |
Verminephrobacter | Comamonadaceae | Burkholderiales | Betaproteobacteria | 1 |
Janthinobacterium | Oxalobacteraceae | Burkholderiales | Betaproteobacteria | 1 or 2 |
Dechloromonas | Rhodocyclaceae | Rhodocyclales | Betaproteobacteria | 10 |
Aeromonas | Aeromonadaceae | Aeromonadales | Gammaproteobacteria | 2 |
Colwellia | Colwelliaceae | Alteromonadales | Gammaproteobacteria | 7 |
Idiomarina | Idiomarinaceae | Alteromonadales | Gammaproteobacteria | 1, 1 |
Shewanella | Shewanellaceae | Alteromonadales | Gammaproteobacteria | 11 strains, 1 each |
Alkalilimnicola | Ectothiorhodospiraceae | Chromatiales | Gammaproteobacteria | 2 |
Halorhodospira | Ectothiorhodospiraceae | Chromatiales | Gammaproteobacteria | 1 |
Methylococcus | Methylococcaceae | Methylococcales | Gammaproteobacteria | 1 |
Oceanospirillum | Oceanospirillales | Gammaproteobacteria | 3 | |
Alcanivorax | Alcanivoraceae | Oceanospirillales | Gammaproteobacteria | 1 |
Azotobacter | Pseudomonadaceae | Pseudomonadales | Gammaproteobacteria | 1 |
Pseudomonas | Pseudomonadaceae | Pseudomonadales | Gammaproteobacteria | 8 strains, 1 each |
Vibrio | Vibrionaceae | Vibrionales | Gammaproteobacteria | 8 strains, 1 each |
Xanthomonas | Xanthomonadaceae | Xanthomonadales | Gammaproteobacteria | 1, 1, 1, 1 |
Reinekea | Gammaproteobacteria | 2 | ||
Bdellovibrio | Bdellovibrionaceae | Bdellovibrionales | Deltaproteobacteria | 1 |
Desulfotalea | Desulfobulbaceae | Desulfobacterales | Deltaproteobacteria | 3 |
Desulfovibrio | Desulfovibrionaceae | Desulfovibrionales | Deltaproteobacteria | 3, 4, 4 |
Desulfuromonas | Desulfuromonadaceae | Desulfuromonadales | Deltaproteobacteria | 10 |
Geobacter | Geobacteraceae | Desulfuromonadales | Deltaproteobacteria | 2, 2, 2, 5 |
Pelobacter | Pelobacteraceae | Desulfuromonadales | Deltaproteobacteria | 3, 1 |
Anaeromyxobacter | Myxococcaceae | Myxococcales | Deltaproteobacteria | 8 |
MLMS1 | Deltaprotebacteria | 5? | ||
Campylobacter | Campylobacteraceae | Campylobacterales | Epsilonproteobacteria | 7, 2, 6, 3, 5, 5, 5, 5, 3, 2, 2, 5 |
Helicobacter | Helicobacteraceae | Campylobacterales | Epsilonproteobacteria | 2 |
Thiomicrospira | Helicobacteraceae | Campylobacterales | Epsilonproteobacteria | 1 |
Wolinella | Helicobacteraceae | Campylobacterales | Epsilonproteobacteria | 1 |
Mariprofundus | Proteobacteria | 1 | ||
Clostridium | Clostridicaeae | Clostridiales | Clostridia, Firmicutes | 1, 6, 5, 1, 2 |
Desulfitobacterium | Peptococcaceae | Clostridiales | Clostridia, Firmicutes | 2, 2 |
Caldocellulosiruptor | Syntrophomonadaceae | Clostridiales | Clostridia, Firmicutes | 1 |
Syntrophomonas | Syntrophomonadaceae | Clostridiales | Clostridia, Firmicutes | 1 |
Thermoanaerobacter | Thermoanaerobacteriaceae | Thermoanaerobacteriales | Clostridia, Firmicutes | 1 |
Leuwenhoekiella | Flavobacteriaceae | Flavobacteriales | Flavobacteria, Bacteroidetes | 1 |
Kuenenia | Planctomycetales | Planctomycetes | 2 | |
Symbiobacterium | Actinobacteria | 1 | ||
Thermosynechococcus | Chroococcales | Cyanobacteria | 2 | |
Haloarcula | Halobacteriaceae | Halobacteriales | Halobacteria, Euryarchaeota | 1 |
Methanocaldococcus | Methanocaldococcaceae | Methanococcales | Methanococci, Euryarchaeota | 1 |
Methanospirillum | Methanospirillaceae | Methanomicrobiales | Methanomicrobia, Euryarchaeota | 2 |