BioMicroCenter:BioinfoClasses

Teaching Schedule

DATE	TIME	Instructor	Location	Room	Topic
Mon May 11, 2015	2pm-3pm	Duanduan Ma	Building 76	76-156a&b	Introduction to UNIX and the KI/BioMicro computational resources
Mon Jun 15, 2015	1:30pm-3pm	Duanduan Ma	Building 68	68-374	Follow Up Course of Introduction to UNIX and the KI/BioMicro computational resources
Mon Jul 13, 2015	10am-11am	Charlie Whittaker	Building 76	76-156a&b	Introduction to Spotfire
Mon Aug 10, 2015	1:30pm-3pm	Duanduan Ma	Building 56	56-602	Introduction to UNIX and the KI/BioMicro computational resources
Mon Sep 14, 2015	1pm-4pm	Duanduan Ma	Building 68	68-374	Introduction to Python
Mon Oct 19, 2015	1pm-4pm	Duanduan Ma	Building 68	68-674	Introduction to Python
Mon Nov 9, 2015	1:30pm-3:30pm	Jie Wu and Vincent Butty	Building 68	68-181	A Traveller's companion to RNA-Seq interpretation QC slides[1] methods slides [2]
Mon Dec 14, 2015	2pm-4pm	Duanduan Ma	Building 68	68-474	Introduction to UNIX and the KI/BioMicro computational resources
Thur Jan 7, 2016	1:30pm-4:30pm	Duanduan Ma	Building 32	32-124	Quantitative Biology Workshop Outreach-Introduction to Python
Fri Jan 29, 2016	9:00am-11:00am	Charlie Whittaker and Duanduan Ma	Building 14N (DIRC)	14N-132	Visualizing and Accessing Genomic Data Using Publically Available Genome Browsers and Databases
Tue Feb 16, 2016	2:00am-3:00am	Sara Strandberg-Qlucore	Building 76	76-156B	Introduction to Qlucore software
Mon Mar 7, 2016	2pm-4pm	Duanduan Ma	Building 56	56-602	Introduction to UNIX and the KI/BioMicro computational resources
Mon April 11, 2016	1pm-4pm	Duanduan Ma	Building 68	68-121	Introduction to R
Mon May 2, 2016	1pm-4pm	Duanduan Ma	Building 68	68-374	Introduction to R
Mon May 9, 2016	1pm-3pm	Qlucore	Building 14N(DIRC)	14N-132	Hands on training of Qlucore software
Mon June 6, 2016	2pm-4pm	Duanduan Ma	Building 68	68-374	Introduction to UNIX and the KI/BioMicro computational resources
Mon Jun 13, 2016	1pm-4pm	Duanduan Ma	Building 76	76-156A/B	Introduction to R
Mon July 11, 2016	1pm-4pm	Duanduan Ma	Building 56	56-602	Introduction to R
Mon Aug 8, 2016	1pm-4pm	Duanduan Ma	Building 68	68-374	Introduction to R
Mon Sep 12, 2016	2pm-4pm	Duanduan Ma	Building 76	76-459	Introduction to UNIX and the KI/BioMicro computational resources
Tue Oct 18, 2016	1pm-3pm	Duanduan Ma	Building 68	68-274	Introduction to UNIX and the KI/BioMicro computational resources
Mon Nov 7, 2016	1:00pm-2:00pm	Jie Wu & Vincent Butty	Building 68	68-181	A Traveler's companion to RNA-Seq interpretation session 1 [3]
Mon Nov 14, 2016	1:00pm-2:00pm	Jie Wu & Vincent Butty	Building 68	68-181	A Traveler's companion to RNA-Seq interpretation session 2 [4]
Mon Dec 12, 2016	2pm-4pm	Duanduan Ma	Building 76	76-259	Introduction to UNIX and the KI/BioMicro computational resources
Thurs Jan 19, 2017	1pm-3pm	Duanduan Ma	Building 68	68-274	Introduction to UNIX and the KI/BioMicro computational resources
Fri Feb 3, 2017	12:00pm-2:00pm	Charlie Whittaker and Duanduan Ma	Building 14N (DIRC)	14N-132	Visualizing and Accessing Genomic Data Using Publically Available Genome Browsers and Databases
Mon Mar 13, 2017	2pm-4pm	Duanduan Ma	Building 68	68-374	Introduction to UNIX and the KI/BioMicro computational resources
Mon April 24, 2017	1pm-4pm	Duanduan Ma	Building 68	68-574	Introduction to Python
Mon May 1, 2017	1pm-4pm	Duanduan Ma	Building 68	68-374	Introduction to Python
Mon June 5, 2017	1pm-4pm	Duanduan Ma	Building 68	68-121	Introduction to Python
Mon July 10, 2017	1pm-4pm	Duanduan Ma	Building 76	76-559	Introduction to Python
Mon Aug 28, 2017	2pm-4pm	Duanduan Ma	Building 68	68-374	Introduction to UNIX and the KI/BioMicro computational resources
Mon Sep 25, 2017	2:00pm-3:00pm	Vincent Butty	Building 68	68-181	RNA-Seq Experimental design + QC ; Slides [5]
Mon Oct 2, 2017	1:00pm-2:00pm	Vincent Butty	Building 68	68-181	RNA-Seq analysis ; Slides [6]
Mon Nov 13, 2017	2pm-4pm	Duanduan Ma	Building 76	76-259	Introduction to UNIX and the KI/BioMicro computational resources
Mon Dec 11, 2017	1pm-4pm	Duanduan Ma	Building 56	56-602	Introduction to R
Wed Jan 31, 2018	10am-12pm	Charlie Whittaker	Building 14N (DIRC)	14N-132	Gene Set Enrichment Analysis
Mon Feb 12, 2018	1pm-4pm	Duanduan Ma	Building 76	76-459	Introduction to R
Mon Mar 12, 2018	2pm-4pm	Duanduan Ma	Building 56	56-602	Introduction to UNIX and the KI/BioMicro computational resources
Mon Apr 23, 2018	1:30pm-2:30pm	Duanduan Ma	Building 68	68-181	Introduction to Biopython
Mon May 14, 2018	2:30pm-3:30pm	Duanduan Ma	Building 76	76-259	Introduction to Biopython
Mon June 11, 2018	2:00pm-4:00pm	Duanduan Ma	Building 56	56-602	Introduction to UNIX and the KI/BioMicro computational resourceso Biopython
Mon July 16, 2018	2:30pm-4:00pm	Duanduan Ma	Building 68	68-121	Introduction of Python to biologists session 1
Mon August 13, 2018	2:30pm-4:00pm	Duanduan Ma	Building 76	76-559	Introduction of Python to biologists session 2
Mon September 10, 2018	2:00pm-4:00pm	Duanduan Ma	Building 56	56-602	Introduction to UNIX and the KI/BioMicro computational resources
Tue October 23, 2018	1:30pm-2:30pm	Vincent Butty	Building 68	68-181	A Traveler's companion to RNA-Seq interpretation session 1 - Slides [7]
Mon November 5, 2018	1pm-2pm	Vincent Butty	Building 68	68-181	A Traveler's companion to RNA-Seq interpretation session 2 - Slides [8]
Mon December 10, 2018	2:00pm-4:00pm	Duanduan Ma	Building 76	76-259	Introduction to UNIX and the KI/BioMicro computational resources
Thursday Jan 31, 2019	10am-12pm	Charlie Whittaker	Building 14N (DIRC)	14N-132	Gene Set Enrichment Analysis
Mon February 11, 2019	2:30pm-4:00pm	Duanduan Ma	Building 68	68-674	Introduction of Python to biologists session 1
Mon March 11, 2019	2:30pm-4:30pm	Duanduan Ma	Building 76	76-259	Introduction of Python to biologists session 2
Mon April 8, 2019	2:00pm-4:00pm	Duanduan Ma	Building 68	68-180	Introduction to UNIX and the KI/BioMicro computational resources
Mon May 13, 2019	2pm-4pm	Duanduan Ma	Building 68	68-121	Introduction to R session 1
Mon June 10, 2019	2pm-4pm	Duanduan Ma	Building 76	76-659	Introduction to R session 2
Mon July 8, 2019	2:00pm-4:00pm	Duanduan Ma	Building 68	68-574	Introduction to UNIX and the KI/BioMicro computational resources
Tue August 27, 2019	2:30pm-3:30pm	Jingzhi Zhu & Duanduan Ma	Building 76	76-659	How to install software packages yourself on computing clusters
Wed September 25, 2019	1:00pm-2:00pm	Vincent Butty	Building 68	68-181	A Traveler's companion to RNA-Seq interpretation session 1 - Slides [9]
Wed October 2, 2019	1:00pm-2:00pm	Vincent Butty	Building 68	68-181	A Traveler's companion to RNA-Seq interpretation session 2 - Slides [10]
Mon November 18, 2019	2:00pm-4:00pm	Duanduan Ma	Building 76	76-659	Introduction to UNIX and the KI/BioMicro computational resources
Tues December 10, 2019	1:00pm-2:00pm	BMC/IGB core (Vincent Butty)	Building 68	68-181	Single Cell RNA-Seq Slides: [11]
Mon January 31, 2020	2:00pm-3:30pm	Duanduan Ma	Building 76	76-659	Introduction of machine learning and its applications in biology
Mon February 10, 2020	2:00pm-4:30pm	Duanduan Ma	Building 76	76-659	Introduction to UNIX and the KI/BioMicro computational resources
Mon March 9, 2020	2:30pm-4:00pm	Duanduan Ma	Building 76	76-659	Introduction of Python to biologists session 1
Mon April 17, 2020	2:00pm-4:30pm	Duanduan Ma	Zoom	Zoom link	Introduction to UNIX and the KI/BioMicro computational resources
Fri May 8, 2020	1:00pm-3:30pm	Duanduan Ma	Zoom	Zoom link	Introduction to R session 1
Wed May 13, 2020	1:00pm-3:30pm	Duanduan Ma	Zoom	Zoom link	Introduction to R session 2
Fri May 27, 2020	2:00pm-4:30pm	Duanduan Ma	Zoom	Zoom link	Introduction of Python to biologists session 2
Fri June 5, 2020	2:00pm-4:00pm	Duanduan Ma	Zoom	Zoom link	Introduction of Python to biologists session 1
Mon June 8, 2020	2:00pm-4:00pm	Duanduan Ma	Zoom	Zoom link	Introduction of Python to biologists session 2
Mon June 15, 2020	2:00pm-4:00pm	Duanduan Ma	Zoom	Zoom link	Introduction to Biopython
Mon July 20, 2020	2:00pm-4:00pm	Duanduan Ma	Zoom	Zoom link	Introduction to UNIX and the KI/BioMicro computational resources
Mon September 14, 2020	2:00pm-4:30pm	Duanduan Ma	Zoom	Zoom link	Introduction of machine learning and its applications in biology session I
Mon September 21, 2020	2:00pm-4:30pm	Duanduan Ma and Huiming Ding	Zoom	Zoom link	Introduction of machine learning and its applications in biology session II
Mon October 19, 2020	2:00pm-4:30pm	Duanduan Ma	Zoom	Zoom link	Introduction to UNIX and the KI/BioMicro computational resources
Mon October 26, 2020	2:00pm-4:30pm	Jingzhi Zhu	Zoom	Zoom link	How to install software packages yourself on computing clusters
Mon November 9, 2020	2:00pm-4:30pm	Dikshant Pradhan	Zoom	Zoom link	Public Data Repositories
Wed December 9, 2020	2:00pm-4:30pm	Duanduan Ma	Zoom	Zoom link	Introduction to R session 1
Wed December 16, 2020	2:00pm-4:30pm	Duanduan Ma	Zoom	Zoom link	Introduction to R session 2

Introduction to R

Session 1: Monday, December 9th, 2020 2:00-4:30 PM

Session 2: Monday, December 9th, 2020 2:00-4:30 PM

The zoom link will be distributed before class.

Please contact Duan Ma (duan@mit.edu) to sign up and questions