BioMicroCenter:BioinfoClasses
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DATE | TIME | Instructor | Location | Room | Topic |
---|---|---|---|---|---|
Mon May 11, 2015 | 2pm-3pm | Duanduan Ma | Building 76 | 76-156a&b | Introduction to UNIX and the KI/BioMicro computational resources |
Mon Jun 15, 2015 | 1:30pm-3pm | Duanduan Ma | Building 68 | 68-374 | Follow Up Course of Introduction to UNIX and the KI/BioMicro computational resources |
Mon Jul 13, 2015 | 10am-11am | Charlie Whittaker | Building 76 | 76-156a&b | Introduction to Spotfire |
Mon Aug 10, 2015 | 1:30pm-3pm | Duanduan Ma | Building 56 | 56-602 | Introduction to UNIX and the KI/BioMicro computational resources |
Mon Sep 14, 2015 | 1pm-4pm | Duanduan Ma | Building 68 | 68-374 | Introduction to Python |
Mon Oct 19, 2015 | 1pm-4pm | Duanduan Ma | Building 68 | 68-674 | Introduction to Python |
Mon Nov 9, 2015 | 1:30pm-3:30pm | Jie Wu and Vincent Butty | Building 68 | 68-181 | A Traveller's companion to RNA-Seq interpretation
QC slides[1] methods slides [2] |
Mon Dec 14, 2015 | 2pm-4pm | Duanduan Ma | Building 68 | 68-474 | Introduction to UNIX and the KI/BioMicro computational resources |
Thur Jan 7, 2016 | 1:30pm-4:30pm | Duanduan Ma | Building 32 | 32-124 | Quantitative Biology Workshop Outreach-Introduction to Python |
Fri Jan 29, 2016 | 9:00am-11:00am | Charlie Whittaker and Duanduan Ma | Building 14N (DIRC) | 14N-132 | Visualizing and Accessing Genomic Data Using Publically Available Genome Browsers and Databases |
Tue Feb 16, 2016 | 2:00am-3:00am | Sara Strandberg-Qlucore | Building 76 | 76-156B | Introduction to Qlucore software |
Mon Mar 7, 2016 | 2pm-4pm | Duanduan Ma | Building 56 | 56-602 | Introduction to UNIX and the KI/BioMicro computational resources |
Mon April 11, 2016 | 1pm-4pm | Duanduan Ma | Building 68 | 68-121 | Introduction to R |
Mon May 2, 2016 | 1pm-4pm | Duanduan Ma | Building 68 | 68-374 | Introduction to R |
Mon May 9, 2016 | 1pm-3pm | Qlucore | Building 14N(DIRC) | 14N-132 | Hands on training of Qlucore software |
Mon June 6, 2016 | 2pm-4pm | Duanduan Ma | Building 68 | 68-374 | Introduction to UNIX and the KI/BioMicro computational resources |
Mon Jun 13, 2016 | 1pm-4pm | Duanduan Ma | Building 76 | 76-156A/B | Introduction to R |
Mon July 11, 2016 | 1pm-4pm | Duanduan Ma | Building 56 | 56-602 | Introduction to R |
Mon Aug 8, 2016 | 1pm-4pm | Duanduan Ma | Building 68 | 68-374 | Introduction to R |
Mon Sep 12, 2016 | 2pm-4pm | Duanduan Ma | Building 76 | 76-459 | Introduction to UNIX and the KI/BioMicro computational resources |
Tue Oct 18, 2016 | 1pm-3pm | Duanduan Ma | Building 68 | 68-274 | Introduction to UNIX and the KI/BioMicro computational resources |
Mon Nov 7, 2016 | 1:00pm-2:00pm | Jie Wu & Vincent Butty | Building 68 | 68-181 | A Traveler's companion to RNA-Seq interpretation session 1 [3] |
Mon Nov 14, 2016 | 1:00pm-2:00pm | Jie Wu & Vincent Butty | Building 68 | 68-181 | A Traveler's companion to RNA-Seq interpretation session 2 [4] |
Mon Dec 12, 2016 | 2pm-4pm | Duanduan Ma | Building 76 | 76-259 | Introduction to UNIX and the KI/BioMicro computational resources |
Thurs Jan 19, 2017 | 1pm-3pm | Duanduan Ma | Building 68 | 68-274 | Introduction to UNIX and the KI/BioMicro computational resources |
Fri Feb 3, 2017 | 12:00pm-2:00pm | Charlie Whittaker and Duanduan Ma | Building 14N (DIRC) | 14N-132 | Visualizing and Accessing Genomic Data Using Publically Available Genome Browsers and Databases |
Mon Mar 13, 2017 | 2pm-4pm | Duanduan Ma | Building 68 | 68-374 | Introduction to UNIX and the KI/BioMicro computational resources |
Mon April 24, 2017 | 1pm-4pm | Duanduan Ma | Building 68 | 68-574 | Introduction to Python |
Mon May 1, 2017 | 1pm-4pm | Duanduan Ma | Building 68 | 68-374 | Introduction to Python |
Mon June 5, 2017 | 1pm-4pm | Duanduan Ma | Building 68 | 68-121 | Introduction to Python |
Mon July 10, 2017 | 1pm-4pm | Duanduan Ma | Building 76 | 76-559 | Introduction to Python |
Mon Aug 28, 2017 | 2pm-4pm | Duanduan Ma | Building 68 | 68-374 | Introduction to UNIX and the KI/BioMicro computational resources |
Mon Sep 25, 2017 | 2:00pm-3:00pm | Vincent Butty | Building 68 | 68-181 | RNA-Seq Experimental design + QC ; Slides [5] |
Mon Oct 2, 2017 | 1:00pm-2:00pm | Vincent Butty | Building 68 | 68-181 | RNA-Seq analysis ; Slides [6] |
Mon Nov 13, 2017 | 2pm-4pm | Duanduan Ma | Building 76 | 76-259 | Introduction to UNIX and the KI/BioMicro computational resources |
Mon Dec 11, 2017 | 1pm-4pm | Duanduan Ma | Building 56 | 56-602 | Introduction to R |
Wed Jan 31, 2018 | 10am-12pm | Charlie Whittaker | Building 14N (DIRC) | 14N-132 | Gene Set Enrichment Analysis |
Mon Feb 12, 2018 | 1pm-4pm | Duanduan Ma | Building 76 | 76-459 | Introduction to R |
Mon Mar 12, 2018 | 2pm-4pm | Duanduan Ma | Building 56 | 56-602 | Introduction to UNIX and the KI/BioMicro computational resources |
Mon Apr 23, 2018 | 1:30pm-2:30pm | Duanduan Ma | Building 68 | 68-181 | Introduction to Biopython |
Mon May 14, 2018 | 2:30pm-3:30pm | Duanduan Ma | Building 76 | 76-259 | Introduction to Biopython |
Mon June 11, 2018 | 2:00pm-4:00pm | Duanduan Ma | Building 56 | 56-602 | Introduction to UNIX and the KI/BioMicro computational resourceso Biopython |
Mon July 16, 2018 | 2:30pm-4:00pm | Duanduan Ma | Building 68 | 68-121 | Introduction of Python to biologists session 1 |
Mon August 13, 2018 | 2:30pm-4:00pm | Duanduan Ma | Building 76 | 76-559 | Introduction of Python to biologists session 2 |
Mon September 10, 2018 | 2:00pm-4:00pm | Duanduan Ma | Building 56 | 56-602 | Introduction to UNIX and the KI/BioMicro computational resources |
Tue October 23, 2018 | 1:30pm-2:30pm | Vincent Butty | Building 68 | 68-181 | A Traveler's companion to RNA-Seq interpretation session 1 - Slides [7] |
Mon November 5, 2018 | 1pm-2pm | Vincent Butty | Building 68 | 68-181 | A Traveler's companion to RNA-Seq interpretation session 2 - Slides [8] |
Mon December 10, 2018 | 2:00pm-4:00pm | Duanduan Ma | Building 76 | 76-259 | Introduction to UNIX and the KI/BioMicro computational resources |
Thursday Jan 31, 2019 | 10am-12pm | Charlie Whittaker | Building 14N (DIRC) | 14N-132 | Gene Set Enrichment Analysis |
Mon February 11, 2019 | 2:30pm-4:00pm | Duanduan Ma | Building 68 | 68-674 | Introduction of Python to biologists session 1 |
Mon March 11, 2019 | 2:30pm-4:30pm | Duanduan Ma | Building 76 | 76-259 | Introduction of Python to biologists session 2 |
Mon April 8, 2019 | 2:00pm-4:00pm | Duanduan Ma | Building 68 | 68-180 | Introduction to UNIX and the KI/BioMicro computational resources |
Mon May 13, 2019 | 2pm-4pm | Duanduan Ma | Building 68 | 68-121 | Introduction to R session 1 |
Mon June 10, 2019 | 2pm-4pm | Duanduan Ma | Building 76 | 76-659 | Introduction to R session 2 |
Mon July 8, 2019 | 2:00pm-4:00pm | Duanduan Ma | Building 68 | 68-574 | Introduction to UNIX and the KI/BioMicro computational resources |
Tue August 27, 2019 | 2:30pm-3:30pm | Jingzhi Zhu & Duanduan Ma | Building 76 | 76-659 | How to install software packages yourself on computing clusters |
Wed September 25, 2019 | 1:00pm-2:00pm | Vincent Butty | Building 68 | 68-181 | A Traveler's companion to RNA-Seq interpretation session 1 - Slides [9] |
Wed October 2, 2019 | 1:00pm-2:00pm | Vincent Butty | Building 68 | 68-181 | A Traveler's companion to RNA-Seq interpretation session 2 - Slides [10] |
Mon November 18, 2019 | 2:00pm-4:00pm | Duanduan Ma | Building 76 | 76-659 | Introduction to UNIX and the KI/BioMicro computational resources |
Tues December 10, 2019 | 1:00pm-2:00pm | BMC/IGB core (Vincent Butty) | Building 68 | 68-181 | Single Cell RNA-Seq Slides: [11] |
Mon January 31, 2020 | 2:00pm-3:30pm | Duanduan Ma | Building 76 | 76-659 | Introduction of machine learning and its applications in biology |
Mon February 10, 2020 | 2:00pm-4:30pm | Duanduan Ma | Building 76 | 76-659 | Introduction to UNIX and the KI/BioMicro computational resources |
Mon March 9, 2020 | 2:30pm-4:00pm | Duanduan Ma | Building 76 | 76-659 | Introduction of Python to biologists session 1 |
Mon April 17, 2020 | 2:00pm-4:30pm | Duanduan Ma | Zoom | Zoom link | Introduction to UNIX and the KI/BioMicro computational resources |
Fri May 8, 2020 | 1:00pm-3:30pm | Duanduan Ma | Zoom | Zoom link | Introduction to R session 1 |
Wed May 13, 2020 | 1:00pm-3:30pm | Duanduan Ma | Zoom | Zoom link | Introduction to R session 2 |
Fri May 27, 2020 | 2:00pm-4:30pm | Duanduan Ma | Zoom | Zoom link | Introduction of Python to biologists session 2 |
Fri June 5, 2020 | 2:00pm-4:00pm | Duanduan Ma | Zoom | Zoom link | Introduction of Python to biologists session 1 |
Mon June 8, 2020 | 2:00pm-4:00pm | Duanduan Ma | Zoom | Zoom link | Introduction of Python to biologists session 2 |
Mon June 15, 2020 | 2:00pm-4:00pm | Duanduan Ma | Zoom | Zoom link | Introduction to Biopython |
Mon July 20, 2020 | 2:00pm-4:00pm | Duanduan Ma | Zoom | Zoom link | Introduction to UNIX and the KI/BioMicro computational resources |
Mon September 14, 2020 | 2:00pm-4:30pm | Duanduan Ma | Zoom | Zoom link | Introduction of machine learning and its applications in biology session I |
Mon September 21, 2020 | 2:00pm-4:30pm | Duanduan Ma and Huiming Ding | Zoom | Zoom link | Introduction of machine learning and its applications in biology session II |
Mon October 19, 2020 | 2:00pm-4:30pm | Duanduan Ma | Zoom | Zoom link | Introduction to UNIX and the KI/BioMicro computational resources |
Mon October 26, 2020 | 2:00pm-4:30pm | Jingzhi Zhu | Zoom | Zoom link | How to install software packages yourself on computing clusters |
Mon November 9, 2020 | 2:00pm-4:30pm | Dikshant Pradhan | Zoom | Zoom link | Public Data Repositories |
Wed December 9, 2020 | 2:00pm-4:30pm | Duanduan Ma | Zoom | Zoom link | Introduction to R session 1 |
Wed December 16, 2020 | 2:00pm-4:30pm | Duanduan Ma | Zoom | Zoom link | Introduction to R session 2 |
Introduction to R
Session 1: Monday, December 9th, 2020 2:00-4:30 PM
Session 2: Monday, December 9th, 2020 2:00-4:30 PM
The zoom link will be distributed before class.
Please contact Duan Ma (duan@mit.edu) to sign up and questions