BioMicroCenter:BioinfoClasses

From OpenWetWare
Jump to navigationJump to search

Teaching Schedule

DATE TIME Instructor Location Room Topic
Mon May 11, 2015 2pm-3pm Duanduan Ma Building 76 76-156a&b Introduction to UNIX and the KI/BioMicro computational resources
Mon Jun 15, 2015 1:30pm-3pm Duanduan Ma Building 68 68-374 Follow Up Course of Introduction to UNIX and the KI/BioMicro computational resources
Mon Jul 13, 2015 10am-11am Charlie Whittaker Building 76 76-156a&b Introduction to Spotfire
Mon Aug 10, 2015 1:30pm-3pm Duanduan Ma Building 56 56-602 Introduction to UNIX and the KI/BioMicro computational resources
Mon Sep 14, 2015 1pm-4pm Duanduan Ma Building 68 68-374 Introduction to Python
Mon Oct 19, 2015 1pm-4pm Duanduan Ma Building 68 68-674 Introduction to Python
Mon Nov 9, 2015 1:30pm-3:30pm Jie Wu and Vincent Butty Building 68 68-181 A Traveller's companion to RNA-Seq interpretation
 QC slides[1] methods slides [2]
Mon Dec 14, 2015 2pm-4pm Duanduan Ma Building 68 68-474 Introduction to UNIX and the KI/BioMicro computational resources
Thur Jan 7, 2016 1:30pm-4:30pm Duanduan Ma Building 32 32-124 Quantitative Biology Workshop Outreach-Introduction to Python
Fri Jan 29, 2016 9:00am-11:00am Charlie Whittaker and Duanduan Ma Building 14N (DIRC) 14N-132 Visualizing and Accessing Genomic Data Using Publically Available Genome Browsers and Databases
Tue Feb 16, 2016 2:00am-3:00am Sara Strandberg-Qlucore Building 76 76-156B Introduction to Qlucore software
Mon Mar 7, 2016 2pm-4pm Duanduan Ma Building 56 56-602 Introduction to UNIX and the KI/BioMicro computational resources
Mon April 11, 2016 1pm-4pm Duanduan Ma Building 68 68-121 Introduction to R
Mon May 2, 2016 1pm-4pm Duanduan Ma Building 68 68-374 Introduction to R
Mon May 9, 2016 1pm-3pm Qlucore Building 14N(DIRC) 14N-132 Hands on training of Qlucore software
Mon June 6, 2016 2pm-4pm Duanduan Ma Building 68 68-374 Introduction to UNIX and the KI/BioMicro computational resources
Mon Jun 13, 2016 1pm-4pm Duanduan Ma Building 76 76-156A/B Introduction to R
Mon July 11, 2016 1pm-4pm Duanduan Ma Building 56 56-602 Introduction to R
Mon Aug 8, 2016 1pm-4pm Duanduan Ma Building 68 68-374 Introduction to R
Mon Sep 12, 2016 2pm-4pm Duanduan Ma Building 76 76-459 Introduction to UNIX and the KI/BioMicro computational resources
Tue Oct 18, 2016 1pm-3pm Duanduan Ma Building 68 68-274 Introduction to UNIX and the KI/BioMicro computational resources
Mon Nov 7, 2016 1:00pm-2:00pm Jie Wu & Vincent Butty Building 68 68-181 A Traveler's companion to RNA-Seq interpretation session 1 [3]
Mon Nov 14, 2016 1:00pm-2:00pm Jie Wu & Vincent Butty Building 68 68-181 A Traveler's companion to RNA-Seq interpretation session 2 [4]
Mon Dec 12, 2016 2pm-4pm Duanduan Ma Building 76 76-259 Introduction to UNIX and the KI/BioMicro computational resources
Thurs Jan 19, 2017 1pm-3pm Duanduan Ma Building 68 68-274 Introduction to UNIX and the KI/BioMicro computational resources
Fri Feb 3, 2017 12:00pm-2:00pm Charlie Whittaker and Duanduan Ma Building 14N (DIRC) 14N-132 Visualizing and Accessing Genomic Data Using Publically Available Genome Browsers and Databases
Mon Mar 13, 2017 2pm-4pm Duanduan Ma Building 68 68-374 Introduction to UNIX and the KI/BioMicro computational resources
Mon April 24, 2017 1pm-4pm Duanduan Ma Building 68 68-574 Introduction to Python
Mon May 1, 2017 1pm-4pm Duanduan Ma Building 68 68-374 Introduction to Python
Mon June 5, 2017 1pm-4pm Duanduan Ma Building 68 68-121 Introduction to Python
Mon July 10, 2017 1pm-4pm Duanduan Ma Building 76 76-559 Introduction to Python
Mon Aug 28, 2017 2pm-4pm Duanduan Ma Building 68 68-374 Introduction to UNIX and the KI/BioMicro computational resources
Mon Sep 25, 2017 2:00pm-3:00pm Vincent Butty Building 68 68-181 RNA-Seq Experimental design + QC ; Slides [5]
Mon Oct 2, 2017 1:00pm-2:00pm Vincent Butty Building 68 68-181 RNA-Seq analysis ; Slides [6]
Mon Nov 13, 2017 2pm-4pm Duanduan Ma Building 76 76-259 Introduction to UNIX and the KI/BioMicro computational resources
Mon Dec 11, 2017 1pm-4pm Duanduan Ma Building 56 56-602 Introduction to R
Wed Jan 31, 2018 10am-12pm Charlie Whittaker Building 14N (DIRC) 14N-132 Gene Set Enrichment Analysis
Mon Feb 12, 2018 1pm-4pm Duanduan Ma Building 76 76-459 Introduction to R
Mon Mar 12, 2018 2pm-4pm Duanduan Ma Building 56 56-602 Introduction to UNIX and the KI/BioMicro computational resources
Mon Apr 23, 2018 1:30pm-2:30pm Duanduan Ma Building 68 68-181 Introduction to Biopython
Mon May 14, 2018 2:30pm-3:30pm Duanduan Ma Building 76 76-259 Introduction to Biopython
Mon June 11, 2018 2:00pm-4:00pm Duanduan Ma Building 56 56-602 Introduction to UNIX and the KI/BioMicro computational resourceso Biopython
Mon July 16, 2018 2:30pm-4:00pm Duanduan Ma Building 68 68-121 Introduction of Python to biologists session 1
Mon August 13, 2018 2:30pm-4:00pm Duanduan Ma Building 76 76-559 Introduction of Python to biologists session 2
Mon September 10, 2018 2:00pm-4:00pm Duanduan Ma Building 56 56-602 Introduction to UNIX and the KI/BioMicro computational resources
Tue October 23, 2018 1:30pm-2:30pm Vincent Butty Building 68 68-181 A Traveler's companion to RNA-Seq interpretation session 1 - Slides [7]
Mon November 5, 2018 1pm-2pm Vincent Butty Building 68 68-181 A Traveler's companion to RNA-Seq interpretation session 2 - Slides [8]
Mon December 10, 2018 2:00pm-4:00pm Duanduan Ma Building 76 76-259 Introduction to UNIX and the KI/BioMicro computational resources
Thursday Jan 31, 2019 10am-12pm Charlie Whittaker Building 14N (DIRC) 14N-132 Gene Set Enrichment Analysis
Mon February 11, 2019 2:30pm-4:00pm Duanduan Ma Building 68 68-674 Introduction of Python to biologists session 1
Mon March 11, 2019 2:30pm-4:30pm Duanduan Ma Building 76 76-259 Introduction of Python to biologists session 2
Mon April 8, 2019 2:00pm-4:00pm Duanduan Ma Building 68 68-180 Introduction to UNIX and the KI/BioMicro computational resources
Mon May 13, 2019 2pm-4pm Duanduan Ma Building 68 68-121 Introduction to R session 1
Mon June 10, 2019 2pm-4pm Duanduan Ma Building 76 76-659 Introduction to R session 2
Mon July 8, 2019 2:00pm-4:00pm Duanduan Ma Building 68 68-574 Introduction to UNIX and the KI/BioMicro computational resources
Tue August 27, 2019 2:30pm-3:30pm Jingzhi Zhu & Duanduan Ma Building 76 76-659 How to install software packages yourself on computing clusters
Wed September 25, 2019 1:00pm-2:00pm Vincent Butty Building 68 68-181 A Traveler's companion to RNA-Seq interpretation session 1 - Slides [9]
Wed October 2, 2019 1:00pm-2:00pm Vincent Butty Building 68 68-181 A Traveler's companion to RNA-Seq interpretation session 2 - Slides [10]
Mon November 18, 2019 2:00pm-4:00pm Duanduan Ma Building 76 76-659 Introduction to UNIX and the KI/BioMicro computational resources
Tues December 10, 2019 1:00pm-2:00pm BMC/IGB core (Vincent Butty) Building 68 68-181 Single Cell RNA-Seq Slides: [11]
Mon January 31, 2020 2:00pm-3:30pm Duanduan Ma Building 76 76-659 Introduction of machine learning and its applications in biology
Mon February 10, 2020 2:00pm-4:30pm Duanduan Ma Building 76 76-659 Introduction to UNIX and the KI/BioMicro computational resources
Mon March 9, 2020 2:30pm-4:00pm Duanduan Ma Building 76 76-659 Introduction of Python to biologists session 1
Mon April 17, 2020 2:00pm-4:30pm Duanduan Ma Zoom Zoom link Introduction to UNIX and the KI/BioMicro computational resources
Fri May 8, 2020 1:00pm-3:30pm Duanduan Ma Zoom Zoom link Introduction to R session 1
Wed May 13, 2020 1:00pm-3:30pm Duanduan Ma Zoom Zoom link Introduction to R session 2
Fri May 27, 2020 2:00pm-4:30pm Duanduan Ma Zoom Zoom link Introduction of Python to biologists session 2
Fri June 5, 2020 2:00pm-4:00pm Duanduan Ma Zoom Zoom link Introduction of Python to biologists session 1
Mon June 8, 2020 2:00pm-4:00pm Duanduan Ma Zoom Zoom link Introduction of Python to biologists session 2
Mon June 15, 2020 2:00pm-4:00pm Duanduan Ma Zoom Zoom link Introduction to Biopython
Mon July 20, 2020 2:00pm-4:00pm Duanduan Ma Zoom Zoom link Introduction to UNIX and the KI/BioMicro computational resources
Mon September 14, 2020 2:00pm-4:30pm Duanduan Ma Zoom Zoom link Introduction of machine learning and its applications in biology session I
Mon September 21, 2020 2:00pm-4:30pm Duanduan Ma and Huiming Ding Zoom Zoom link Introduction of machine learning and its applications in biology session II
Mon October 19, 2020 2:00pm-4:30pm Duanduan Ma Zoom Zoom link Introduction to UNIX and the KI/BioMicro computational resources
Mon October 26, 2020 2:00pm-4:30pm Jingzhi Zhu Zoom Zoom link How to install software packages yourself on computing clusters
Mon November 9, 2020 2:00pm-4:30pm Dikshant Pradhan Zoom Zoom link Public Data Repositories
Wed December 9, 2020 2:00pm-4:30pm Duanduan Ma Zoom Zoom link Introduction to R session 1
Wed December 16, 2020 2:00pm-4:30pm Duanduan Ma Zoom Zoom link Introduction to R session 2


Introduction to R

Session 1: Monday, December 9th, 2020 2:00-4:30 PM
Session 2: Monday, December 9th, 2020 2:00-4:30 PM

The zoom link will be distributed before class.

Please contact Duan Ma (duan@mit.edu) to sign up and questions