BioGRID with Osprey

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This presentation from the BioMIBLab Summer 2006 Workshop is a database bioinformatics tool.

This presentation covers the bioinformatics tool BioGRID and its companion tool, Osprey.

Synopsis

BioGRID
A database of protein-protein interactions for searching proteins of interest to retrieve primary information as well as physical and genetic interaction data
Osprey
A visualization tool powered by BioGRID tha shows graphical relationships between proteins

Features

BioGRID
  • Realtime site statistics
  • Can search an organism by
Genebank ID
Entrez-Gene ID
SGD ID
Gene name
  • Links to all known related enzymes
  • Links to information in other databases
Osprey
  • Links to information included in BioGRID
  • Add in known enzymes
Shows BioGRID data on the enzyme
  • Visualize links to related enzymes
  • Extended visualization
  • View information on relationship between enzymes
  • Links to database websites with more information

Full Presentation

BioGRID PowerPoint Presentation

Links

BioGRID Homepage

Osprey Platform Homepage