User:Jarle Pahr/COBRA
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CobraPy: https://groups.google.com/forum/#!forum/cobra-pie
http://cobramethods.wikidot.com/methods
http://systemsbiology.ucsd.edu/cobra-methods
COBRA review. Articles using COBRA methods:
http://sbrg.ucsd.edu/cobra-predictions-app/
- Includes world map of articles and highlighting of "key papers".
- Lists type of comparison to experimental data.
http://systemsbiology.ucsd.edu/Publications/Books/SB1Lectureslides
Comprehensive catalog of COBRA methods: http://cobramethods.wikidot.com/
rBioNet: A COBRA toolbox extension for reconstructing high-quality biochemical networks. http://www.ncbi.nlm.nih.gov/pubmed/21596791
COBRA Toolbox
Load model:
model = readCbModel()
Optimize model:
result = optimizeCbModel(model)