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- Erickson C, Giertych B, Akhter H, Wang L, Stewart A, Parenti J, Wang B, Wen S, Sim S, Quenneville E, Hansen K, Frisch S, Hu G (2022) Matrix from urine stem cells...23 KB (3,731 words) - 13:01, 23 June 2024
- Computational Tools (section SimThyr)SBW (Systems Biology Workbench) http://simthyr.sf.net Johannes W. Dietrich SimThyr is a continuous numeric simulation program for thyroid homeostasis. It...26 KB (3,555 words) - 17:05, 9 October 2016
- directory: sims-RefDBs-rpoB-n20-m5/sims-rpoB-n500m18r2000q-1p400u20/ sim1 subdirectory: sim1-rpoB-n500m18r2000q-1p400u20/ alignment files in the sim1 subdirectory:...9 KB (1,514 words) - 15:20, 17 August 2017
- initializeTreeSeq(); } For the generation to be treated as the founder generation, include the command: <generation #> late() { ... sim.treeSeqRememberIndividuals(sim...20 KB (2,538 words) - 12:32, 13 December 2021
- estimation on 8 core computer full ML with 700 seqs = 9 hours without bootstrapping using reference seq tree as a guide tree speeds it up to 1-2 hours...1 KB (202 words) - 14:50, 17 August 2017
- Simulations Martin's data is on bobcat.genomecenter.ucdavis.edu/AMPHORA website metaSim, JGI simulation paper (datasets available, not clear exactly how done) Make...2 KB (278 words) - 14:46, 17 August 2017
- sequences depends on which Illumina sequencer you used - currently NextSeq and HiSeq 4000 need the reverse complement 2) Make sure to save this file as a...102 KB (14,283 words) - 14:09, 31 May 2024
- retriev orthog group information comp sig score for ecah group based on indiv seq seq score outputs sig score for orthog group - average likelihood of score within...7 KB (831 words) - 17:43, 26 June 2007
- Zhang Y, Liu XS: CistromeMap: a knowledgebase and web server for ChIP-Seq and DNase-Seq studies in mouse and human. Bioinformatics 28 (2012) 1411-1412. Xiao...55 KB (7,535 words) - 14:26, 13 July 2020
- the use valve on the empty tank get wrenches from the drawer under the MiSeq. They are big & adjustable. take off the regulator - can be physically difficult...30 KB (5,052 words) - 12:02, 5 March 2014
- bqpqVhaK2yc1ncq2Rxt1JSxiccGVlyUuy+wu8ZOE5eJOIntfLLZj/ZuoWg1kX/XzG3Wl58fmmSEqTaL4CvJkBSbIzs6vxGGKaaHcV8DeSnty/URWHpN0knSFphaS3STqogMt26qJvtNa3MRiZ9PvQu...299 KB (0 words) - 23:30, 26 September 2017
