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- trinityrnaseq: r20140413p1 bedtools: 2.20.1 bowtie2: 2.2.3 tophat: 2.0.12 rsem: 1.2.15 fastqc: 0.11.2 bwa: 0.7.10 pear: 0.9.4 perl: 5.20.0 samtools: 1.0...8 KB (1,142 words) - 09:30, 3 January 2017
- r/2.15.3 trinityrnaseq/r2013-02-25 bwa/0.6.1(default) ki-bmc/pipeline_0.9 rsem/1.2.3(default) ucsc-tools/20120530(default) casava/1.8.2 ki-bmc/pipeline_1...9 KB (1,186 words) - 11:07, 14 December 2022
- rmean)^2) % mean VSEM = std(V)/sqrt(length(V)) ISEM = std(I)/sqrt(length(I)) rSEM = std(r)/sqrt(length(r)) BSEM = 7.8e-4 * std(I)/sqrt(length(I)) r = [4.0...22 KB (2,056 words) - 22:43, 16 November 2008
- rmean)^2) % mean VSEM = std(V)/sqrt(length(V)) ISEM = std(I)/sqrt(length(I)) rSEM = std(r)/sqrt(length(r)) BSEM = 7.8e-4 * std(I)/sqrt(length(I)) r = [4.0...22 KB (2,056 words) - 18:57, 6 August 2010
- rmean)^2) % mean VSEM = std(V)/sqrt(length(V)) ISEM = std(I)/sqrt(length(I)) rSEM = std(r)/sqrt(length(r)) BSEM = 7.8e-4 * std(I)/sqrt(length(I)) r = [4.0...22 KB (2,056 words) - 10:45, 24 August 2009
- expression after you have generated bam files. Some recommended tools include: RSEM sleuth Note: sleuth should be used with kallisto output Whether you use an...102 KB (14,283 words) - 14:09, 31 May 2024
