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- of producing results files Convert to qseq using the program CASAVA 2. rsync (e.g. Pellegrini Lab) Retrieve qseq (not deplexed) files 3. ftp site (e.g...19 KB (2,213 words) - 19:56, 29 May 2013
- (10/18/2011) Implemented all core functionality: setting up and converting qseq files qseq to fastq fastqc and tag count statistics on flowcell-level sequences...13 KB (1,993 words) - 15:21, 14 December 2022
- Solexa). 454 - 454/Roche. Short Read Toolbox - Descriptions and examples of qseq, scarf, fastq and fasta formats. Includes scripts to translate these formats...5 KB (463 words) - 20:17, 20 June 2012
- guest password: illumina Short Read Toolbox - Descriptions and examples of qseq, scarf, fastq and fasta formats. Includes scripts to translate these formats...8 KB (650 words) - 00:46, 6 June 2012
- data. Basic command: python runHMM.py -o output_dir -i input_RNA-seq_data.qseq -q quality_type -g genome4mapping -j min_intron_size -k max_intron_size -p...12 KB (1,677 words) - 09:50, 30 September 2014
- Protocols blc qseq fastq <--> fasta sam <--> bam bcf <--> vcf Many conversion scripts exist either on the internet (googling fastq/qseq conversion shows...39 KB (4,594 words) - 15:27, 22 August 2017
- "Hsp_hseq")[0].childNodes) id_hit = get_text(v.getElementsByTagName("Hsp_qseq")[0].childNodes) score = get_text(v.getElementsByTagName("Hsp_score")[0]...3 KB (453 words) - 05:42, 3 May 2007
- "Hsp_hseq")[0].childNodes) id_hit = get_text(v.getElementsByTagName("Hsp_qseq")[0].childNodes) score = get_text(v.getElementsByTagName("Hsp_score")[0]...15 KB (2,257 words) - 08:19, 3 May 2007
- "Hsp_hseq")[0].childNodes) id_hit = get_text(v.getElementsByTagName("Hsp_qseq")[0].childNodes) score = get_text(v.getElementsByTagName("Hsp_score")[0]...22 KB (3,308 words) - 10:25, 3 May 2007
