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- Wikiomics:Repeat finding (section Piler (with lastz))output of i.e. Newbler needs to be fixed lastz my_fasta_input.fa[multiple] my_fasta_input.fa --output=my_fasta_lastz_output.csv \ --format=general:name2,zstart2...12 KB (1,610 words) - 05:06, 2 December 2010
- edu/~rsharris/lastz/ latest stable release: 2010-Jan-12 documentation: http://www.bx.psu.edu/miller_lab/dist/README.lastz-1.02.00/README.lastz-1.02.00a.html...4 KB (646 words) - 03:50, 17 March 2011
- '\t' + '''#Determine difference between reads and assembly: ''' + '\t' + '''lastz template $(READS) $R | $C/lav_processor | $C/template_hits template $(READS)...19 KB (2,380 words) - 12:09, 8 September 2010
- SAMtools - SAMtools. MAFFT - MAFFT. T-Coffee - T-Coffee. Muscle - Muscle. LASTZ - LASTZ, hosted at the Miller lab. MUMmer - MUMmer. Mulan Multiple Sequence Alignment...8 KB (647 words) - 17:46, 5 June 2012
- sumqual.py, and qualtofa.py. It also uses yasra and its binaries, including lastz. It must be possible for the python interpreter to find these scripts to...13 KB (1,760 words) - 17:06, 22 September 2010
- sumqual.py, and qualtofa.py. It also uses yasra and its binaries, including lastz. It must be possible for the python interpreter to find these scripts to...9 KB (338 words) - 17:07, 22 September 2010
- sumqual.py, and qualtofa.py. It also uses yasra and its binaries, including lastz. It must be possible for the python interpreter to find these scripts to...13 KB (1,760 words) - 17:07, 22 September 2010
