Search results
From OpenWetWare
Jump to navigationJump to search
- 12345678:ANALYSIS eland_extended 12345678:ELAND_SEED_LENGTH 25 123:ELAND_GENOME /data/Genome/Eland/RefGenome_Eland_sacCersgd 5:ELAND_GENOME /data/Genome/Eland/RefGenome_Eland_PhiX...16 KB (2,406 words) - 12:14, 13 January 2011
- chr15 18263955 18263990 + The eland_multi files actually has the original sequence data in it as well as the mapping. (ELAND: Efficient Local Alignment of...13 KB (0 words) - 16:51, 26 September 2017
- interactive ELAND algorithm. An in-depth QC report of the data is included in the package. Output Files: sequence.txt eland_query.txt eland_result.txt realign...3 KB (445 words) - 15:29, 7 January 2009
- v1.1 so in theory included a ELAND -> ALN conversion executable - except I can not make it work for me. Perhaps the ELAND format is slightly different...2 KB (0 words) - 16:23, 26 September 2017
- findpeaks3-1-9-2-tar 22.test.eland AlignSlice.jar ElandtoBed.jar FindPeaks.jar findpeaksManual.pdf ParseMultipleElands.jar SeparateElandReads.jar VulgartoBed.jar...3 KB (0 words) - 17:11, 26 September 2017
- -jar FindPeaks.jar -name test -input /path/to/*.part.eland.gz -output /output_path/ \ -aligner eland -one_per -dist_type 1 200 ' You may need to add the...3 KB (0 words) - 17:32, 26 September 2017
- data is aligned to a reference genome, if requested, using an interative ELAND algorithm. An in-depth QC report is included in the package....2 KB (238 words) - 09:39, 30 September 2011
- data is aligned to a reference genome, if requested, using an interative ELAND algorithm. An in-depth QC report is included in the package. Sample QC report...3 KB (423 words) - 13:27, 7 January 2009
- data is aligned to a reference genome, if requested, using an interative ELAND algorithm. An in-depth QC report is included in the package. Sample QC report...3 KB (434 words) - 13:27, 7 January 2009
- data is aligned to a reference genome, if requested, using an interative ELAND algorithm. An in-depth QC report is included in the package. Sample QC report...4 KB (454 words) - 18:36, 31 March 2010
- FASTQ or FASTA Read >= 50bp Base mappers: Bowtie (preferred) others: SeqMap, Eland Features: "Support for arbitrarily long uneven read lengths" http://www.alexaplatform...12 KB (1,677 words) - 02:50, 30 September 2014
- adapted, when I don't have a control file (want to use ISL1 but that is an ELAND format). The LW FDR seems to more resemble the concept used in CisGenome...9 KB (0 words) - 17:10, 26 September 2017
- doi:10.1093/bfgp/elq031 Davey, J. W., Cezard, T., Fuentes-Utrilla, P., Eland, C., Gharbi, K. and Blaxter, M. L. (2012), Special features of RAD Sequencing...20 KB (3,149 words) - 10:52, 27 September 2017
- ion/PSNPAnalysisPipeline.java A trunk/testdata A trunk/testdata/22.test.eland A trunk/testdata/p53.map A trunk/classes A trunk/build.xml U trunk Révision...15 KB (0 words) - 17:32, 26 September 2017
- tection/PSNPAnalysisPipeline.java trunk/testdata trunk/testdata/22.test.eland trunk/classes trunk/build.xml trunk Révision 1325 extraite. Finally, the...15 KB (0 words) - 17:11, 26 September 2017
- aln1@4000001.map dword.hh Makefile pair_stat.o altchr.cc eland2maq.cc Makefile.am pileup.cc altchr.o eland2maq.o Makefile.generic pileup.o assemble.cc fasta2bfa...12 KB (0 words) - 17:10, 26 September 2017
