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- Wikiomics:RNA-Seq (section Tophat and Cufflinks)data. Supports mixed length reads (suitable i.e. for 454 data) Cufflinks: web: http://cufflinks.cbcb.umd.edu/ current version: 2.2.1 released 2.2.1 release...12 KB (1,677 words) - 02:50, 30 September 2014
- 0(default) cufflinks/2.0.1 ki-bmc/pipeline_1.2.1 snpsnift/1.3.4b bedtools/2.16.1 cufflinks/2.0.2 materialsstudio/6.0 sra/2.1.10 bedtools/2.17.0 cufflinks/2.1...9 KB (1,186 words) - 11:07, 14 December 2022
- fq > myreads_vs_ref_gen.gsnap.sam web site: http://cufflinks.cbcb.umd.edu/ Version: 2.1.1 cufflinks -p 8 --multi-read-correct --min-intron-length 21 --max-intron-length...25 KB (4,166 words) - 10:56, 11 September 2014
- functional annotations have been investigated. A better set of parameters in Cufflinks is to be determined for Prochlorococcus genome. February 28, 2012 Run COG...4 KB (198 words) - 08:09, 9 July 2012
- YASRA contigs. TopHat - A fast splice junction mapper for RNA-Seq reads. Cufflinks - Assembles transcripts, estimates their abundances, and tests for differential...8 KB (647 words) - 17:46, 5 June 2012
- 2010 May;28(5):511-5. DOI:10.1038/nbt.1621 | PubMed ID:20436464 | HubMed [cufflinks] All Medline abstracts: PubMed | HubMed Very Few RNA and DNA Sequence Differences...7 KB (1,427 words) - 16:31, 4 April 2012
