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- 68 68-181 Introduction to Biopython Mon May 14, 2018 2:30pm-3:30pm Duanduan Ma Building 76 76-259 Introduction to Biopython Mon June 11, 2018 2:00pm-4:00pm...24 KB (171 words) - 14:11, 19 September 2023
- rapid development and clean, pragmatic design. web.py PyOpenGL VPython BioPython is a distributed collaborative effort to develop Python libraries and applications...3 KB (203 words) - 00:23, 20 June 2007
- [LucksJB-PlOSCompBio-2008] The Biopython project homepage is at http://biopython.org, and the documentation can be found at http://biopython.org/wiki/Documentation...47 KB (6,829 words) - 23:04, 2 December 2008
- - File conversion, sequence analysis, database searches, graphics, .. BioPython - File conversion, sequence analysis, database searches, graphics, .. BioLib...6 KB (0 words) - 05:24, 5 November 2015
- Biopython is a great tool to saving time when parsing various files....68 bytes (12 words) - 11:58, 29 September 2010
- Evolution: Alignment, Phylogeny, and Evolutionary Rate Analysis Parsing with Biopython Downloaded gene alignments from ensembl via Pycogent Tutorial on how to...1 KB (128 words) - 11:46, 10 July 2013
- residing at http://biopython.org/DIST/biopython-1.42.tar.gz and untar this file into a directory: tar xzvf biopython-1.42.tar.gz cd biopython-1.42 You can alternatively...2 KB (412 words) - 03:58, 6 March 2007
- gov/blast/matrices/ BLOSUM62 is the usual scoring matrix used for amino acid sequences BioPython, BioPerl, and BioJava have modules that extraordinarily simplify BLAST...4 KB (480 words) - 20:56, 15 April 2015
- start and stop codons) As of Biopython ???, feature.extract(genome.seq) incorporates strandedness. Thus, older version of Biopython or sequence slices obtained...12 KB (1,685 words) - 17:17, 19 October 2010
- Harvard:Biophysics 101/2007:Python (section BioPython)Windows installer) Windows Installation Download & Install BioPython direct link to BioPython Windows installer OS X Installation Install xcode tools (either...3 KB (265 words) - 17:37, 19 April 2007
- Harvard:Biophysics 101/2009:Python (section BioPython)Windows installer) Windows Installation Download & Install BioPython direct link to BioPython Windows installer OS X Installation Install xcode tools (either...3 KB (266 words) - 12:41, 13 September 2009
- Foundation coordinates open source bioinformatics software such as BioPerl, Biopython and several other projects. The Bioinformatics Knowledge Base features...6 KB (801 words) - 21:00, 19 November 2007
- Install BioPython - tools for biological computation/ bioinformatics written in Python Download the latest 'tar.gz' file from http://biopython.org/wiki/Download...3 KB (387 words) - 16:17, 23 April 2014
- reading it first as it explains some of the attractions of Python and biopython. One thing I will highlight is using CythonExpansion depth limit exceeded...12 KB (1,744 words) - 07:13, 30 September 2010
- its suffix trees BioPython has some redundancy, both its Meme modules and AlignACE-support can parse and scan for matrices (see Biopython-Meme example) CREAD...2 KB (177 words) - 02:58, 15 January 2008
- family data this needs to be formatted to correctly to reflect that. ml py-biopython/1.70_py27 python /home/groups/schumer/shared_bin/Lab_shared_scripts/sc...15 KB (2,418 words) - 13:08, 7 November 2023
- interesting stuff... I found code from the biopython cookbook which retrieves a BLAST ID, and then based on http://biopython.org/DIST/docs/api/public/Bio.Blast...1 KB (208 words) - 22:03, 19 March 2007
- Abhishek Tiwari:Links (section Python and Biopython)Python Library Reference [25] Python Tutorial --Guido van Rossum [26] Biopython Tutorial and Cookbook --Jeff Chang, Brad Chapman, Iddo Friedberg [27] Python...27 KB (1,646 words) - 20:07, 4 August 2008
- Treatment recommendations Frequency of deleterious allele Find out how BioPython can be used to access the info Contact the appropriate people to get more...1 KB (188 words) - 23:18, 18 April 2007
- downside is that while the overall scope is similar to that of Biopython (www.biopython.org ; another valuable bioinformatics research tool). The API approach...2 KB (331 words) - 15:48, 11 December 2010
