Registry of Standard Biological Models/CellML Practical/Promoter models

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Constitutive Promoter Model

  • Assumptions:
    • continuous expression at a fix transcription rate
    • unlimited resources in transcription (polymerases + mRNA)
    • No activation or repression involved
  • BioBrick example:
  • CellML interface
  • CellML file


Repressed Promoter Model

  • Assumptions:
    • simple binding of the repressor following a Monod-type of equation
    • Maximum rate of transcription
    • unlimited resources in transcription (polymerases + mRNA)
  • BioBrick example:
  • CellML interface
  • CellML file


Activated Promoter Model

  • Assumptions:
    • simple binding of the activator following a Monod-type of equation
    • Maximum rate of transcription
    • unlimited resources in transcription (polymerases + mRNA)
  • BioBrick example:
  • CellML interface
  • CellML file
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