Synthetic Biology:Semantic web ontology

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**[[SynBERC:MIT|MIT SynBERC]]
**[[SynBERC:MIT|MIT SynBERC]]
*[[DOI|DOI & LSID info]]
*[[DOI|DOI & LSID info]]
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*[http://slam.bs.jhmi.edu/gd/ GeneDesign β2.0]
 
*[http://researchweb.watson.ibm.com/journal/sj/402/haas.html IBM DiscoveryLink] provides users with a virtual database to which they can pose arbitrarily complex queries, even though the actual data needed to answer the query may originate from several different sources, and none of those sources, by itself, is capable of answering the query (data integration)
*[http://researchweb.watson.ibm.com/journal/sj/402/haas.html IBM DiscoveryLink] provides users with a virtual database to which they can pose arbitrarily complex queries, even though the actual data needed to answer the query may originate from several different sources, and none of those sources, by itself, is capable of answering the query (data integration)

Revision as of 13:32, 8 September 2006

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Overview

This is a part of the effort to provide a standardized, extensible, scalable and machine-processable interface for the Registry of Standard Biological Parts. The ideas of the Semantic Web seem to provide a solution to this problem. The success of developing a Synthetic Biology ontology depends in part on a good definition of the BioBricks abstraction hierarchy.

Design

Meetings

  • First meeting
Tuesday (9/20/05) at 3pm, room 68-674; minutes
  • Second meeting
Friday (9/23/05) at 10am, room 68-121; minutes

References

Miscellaneous

Contact: Ilya Sytchev

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