Haynes Lab:Notebook/RNA-seq of PcTF Transfected U2OS & SK-N-SH cell lines/2014/12/23: Difference between revisions
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==Notes== | ==Notes== | ||
Overview of flow cytometry data: | |||
[[Image:20141223_flow_cytometry_overview.png | thumb]]<br><br> | |||
Negative control does not have significantly different fluorescence values than the samples (data not shown).<br><br> | |||
==Results/Conclusions== | ==Results/Conclusions== | ||
Since the control has the same fluorescence levels as the samples (and therefore the same gene expression levels of PcTF-mCherry), we will not be performing the RNA extraction / purification today. Instead we'll be repeating this experiment tomorrow on the second set of transfected cells.<br><br> | |||
*'''[[User:David Benjamin Nyer|David Benjamin Nyer]] | *'''[[User:David Benjamin Nyer|David Benjamin Nyer]] 17:27, 23 December 2014 (EST)''': | ||
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Revision as of 15:27, 23 December 2014
RNA-seq of PcTF Transfected U2OS & SK-N-SH cell lines | <html><img src="/images/9/94/Report.png" border="0" /></html> Main project page <html><img src="/images/c/c3/Resultset_previous.png" border="0" /></html>Previous entry<html> </html>Next entry<html><img src="/images/5/5c/Resultset_next.png" border="0" /></html> |
SummaryToday we'll be harvesting the U2OS cells from the first transfection attempt. Fluorescence microscopy of the cells indicates there is little or no PcTF-RFP expression in the line, but we'll be doing a run through with flow cytometry and RNA purification regardless, as practice for future attempts. Goals
Protocolflow cytometry of mammalian cells for measuring fluorescent gene expression Materials
NotesOverview of flow cytometry data: Negative control does not have significantly different fluorescence values than the samples (data not shown). Results/ConclusionsSince the control has the same fluorescence levels as the samples (and therefore the same gene expression levels of PcTF-mCherry), we will not be performing the RNA extraction / purification today. Instead we'll be repeating this experiment tomorrow on the second set of transfected cells.
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