Biomod/2014/HKBUteam/experimentalresults: Difference between revisions
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Conjugation condition | <b>Conjugation condition</b> | ||
Single strand DNA to folic acid/carbon nanodots/chlorambrucil Ratio | Single strand DNA to folic acid/carbon nanodots/chlorambrucil Ratio | ||
1:1 | 1:1 | ||
RTP | RTP | ||
Mixture was vortex for 4 hrs | Mixture was vortex for 4 hrs | ||
In-Complete route | In-Complete route | ||
Folic acid and chlorambrucil were first conjugated and folded, carbon nanodots were added afterwards. | Folic acid and chlorambrucil were first conjugated and folded, carbon nanodots were added afterwards. | ||
Mass-spectrometry | <h4>Mass-spectrometry</h4> | ||
[[Image:expresultSection1_1.jpg|190px]] | |||
[[Image:expresultSection1_2.jpg|190px]] | |||
[[Image:expresultSection1_3.jpg|190px]] | |||
For MS-single stranded DNA A2 , a minor peak at 10120 shows the conjugation of A2 and chlorambrucil. | |||
For MS-single stranded DNA A3 , a minor peak at 7043 shows the conjugation of A3 and folic acid. | |||
For MS-single stranded DNA A6 , a peak at 11171 shows the conjugation of A6 and carbon nanodots. | |||
<h4>DNA extraction after folding of DNA origami</h4> | |||
Gel photo : | |||
[[Image:expresultSection1_4.jpg|190px]]<br> | |||
<h4>Nanodrop Reading</h4> | |||
DNA concentration : 0.8 ng/ul | |||
260/280 : 1.34 | |||
260/230 : 0.86 | |||
Confocal Microscopy | |||
<h4>Confocal Microscopy</h4> | |||
Hep G2 Treatment | |||
[[Image:expresultSection1_5.jpg|190px]][[Image:expresultSection1_6.jpg|190px]][[Image:expresultSection1_7.jpg|190px]] | |||
Hep G2 Control | |||
[[Image:expresultSection1_8.jpg|190px]][[Image:expresultSection1_9.jpg|190px]][[Image:expresultSection1_10.jpg|190px]] | |||
Excitation : 405nm | |||
Emission : 460 – 560nm | |||
==2nd Trial== | ==2nd Trial== | ||
Mass-spectrometry | <b>Conjugation condition</b> | ||
Single strand DNA to folic acid/carbon nanodots/chlorambrucil Ratio | |||
1:1 | |||
RTP | |||
Mixture was vortex for 4 hrs | |||
In-Complete route | |||
Folic acid and chlorambrucil were first conjugated and folded, carbon nanodots were added afterwards. | |||
<h4>Mass-spectrometry</h4> | |||
[[Image:expresultSection2_1.jpg|190px]] | |||
[[Image:expresultSection2_2.jpg|190px]] | |||
For MS-single stranded DNA A2 , a minor peak at 10120 shows the conjugation of A2 and chlorambrucil | |||
For MS-single stranded DNA A3 , a minor peak at 7043 shows the conjugation of A3 and folic acid | |||
<h4>DNA extraction after folding of DNA origami</h4> | |||
Gel photo : | |||
[[Image:expresultSection2_3.jpg|190px]] | |||
<h4>Nanodrop Reading</h4> | |||
DNA concentration : 2.3 ng/ul | |||
260/280 : 1.28 | |||
260/230 : 0.52 | |||
<h4>Confocal Microscopy</h4> | |||
Hep G2 Treatment | |||
[[Image:expresultSection2_4.jpg|190px]][[Image:expresultSection2_5.jpg|190px]][[Image:expresultSection2_6.jpg|190px]] | |||
Hep G2 Control | |||
[[Image:expresultSection2_7.jpg|190px]][[Image:expresultSection2_8.jpg|190px]][[Image:expresultSection2_9.jpg|190px]] | |||
Excitation : 405nm | |||
Emission : 460 – 560nm | |||
==3rd Trial== | ==3rd Trial== | ||
<b>Conjugation condition</b> | |||
Single strand DNA to folic acid/carbon nanodots/chlorambrucil Ratio | |||
1:10 | |||
37oC | |||
Mixture was vortex for 4 hrs | |||
Complete route | |||
All substituent was conjugated and folded simultaneously | |||
<h4>Mass-spectrometry</h4> | |||
[[Image:expresultSection3_1.jpg|190px]] | |||
[[Image:expresultSection3_2.jpg|190px]] | |||
For MS-single stranded DNA A2 , a peak at 10193 shows the conjugation of A2 and chlorambrucil | |||
For MS-single stranded DNA A3 , a peak at 7043 shows the conjugation of A3 and folic acid | |||
<h4>DNA extraction after folding of DNA origami</h4> | |||
Gel photo : | |||
[[Image:expresultSection3_3.jpg|190px]] | |||
<h4>Nanodrop Reading</h4> | |||
DNA concentration : 5.5 ng/ul | |||
260/280 : 2.65 | |||
260/230 : 1.12 | |||
<h4>Confocal Microscopy</h4> | |||
Hep G2 Treatment | |||
[[Image:expresultSection3_4.jpg|190px]][[Image:expresultSection3_5.jpg|190px]][[Image:expresultSection3_6.jpg|190px]] | |||
Hep G2 Control | |||
[[Image:expresultSection3_7.jpg|190px]][[Image:expresultSection3_8.jpg|190px]][[Image:expresultSection3_9.jpg|190px]] | |||
HK-1 Treatment | |||
[[Image:expresultSection3_10.jpg|190px]][[Image:expresultSection3_11.jpg|190px]][[Image:expresultSection3_12.jpg|190px]] | |||
HK-1 Control | |||
[[Image:expresultSection3_13.jpg|190px]][[Image:expresultSection3_14.jpg|190px]][[Image:expresultSection3_15.jpg|190px]] | |||
Excitation : 405nm | |||
Emission : 460 – 560nm | |||
<h4>Emission Spectrum</h4> | |||
Hep G2 HK-1 | |||
[[Image:expresultSection3_16.jpg|190px]][[Image:expresultSection3_17.jpg|190px]] | |||
<h4>AFM photo</h4> | |||
[[Image:expresultSection3_18.jpg|190px]][[Image:expresultSection3_19.jpg|190px]] | |||
[[Image:expresultSection3_20.jpg|190px]][[Image:expresultSection3_21.jpg|190px]] |
Revision as of 09:31, 23 October 2014
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1st Trial
Conjugation condition
Single strand DNA to folic acid/carbon nanodots/chlorambrucil Ratio
1:1
RTP
Mixture was vortex for 4 hrs
In-Complete route
Folic acid and chlorambrucil were first conjugated and folded, carbon nanodots were added afterwards.
Mass-spectrometry
For MS-single stranded DNA A2 , a minor peak at 10120 shows the conjugation of A2 and chlorambrucil.
For MS-single stranded DNA A3 , a minor peak at 7043 shows the conjugation of A3 and folic acid.
For MS-single stranded DNA A6 , a peak at 11171 shows the conjugation of A6 and carbon nanodots.
DNA extraction after folding of DNA origami
Gel photo :
Nanodrop Reading
DNA concentration : 0.8 ng/ul
260/280 : 1.34
260/230 : 0.86
Confocal Microscopy
Hep G2 Treatment
Hep G2 Control
Excitation : 405nm
Emission : 460 – 560nm
2nd Trial
Conjugation condition
Single strand DNA to folic acid/carbon nanodots/chlorambrucil Ratio
1:1
RTP
Mixture was vortex for 4 hrs
In-Complete route
Folic acid and chlorambrucil were first conjugated and folded, carbon nanodots were added afterwards.
Mass-spectrometry
For MS-single stranded DNA A2 , a minor peak at 10120 shows the conjugation of A2 and chlorambrucil
For MS-single stranded DNA A3 , a minor peak at 7043 shows the conjugation of A3 and folic acid
DNA extraction after folding of DNA origami
Gel photo :
Nanodrop Reading
DNA concentration : 2.3 ng/ul
260/280 : 1.28
260/230 : 0.52
Confocal Microscopy
Hep G2 Treatment
Hep G2 Control
Excitation : 405nm
Emission : 460 – 560nm
3rd Trial
Conjugation condition
Single strand DNA to folic acid/carbon nanodots/chlorambrucil Ratio
1:10
37oC
Mixture was vortex for 4 hrs
Complete route
All substituent was conjugated and folded simultaneously
Mass-spectrometry
For MS-single stranded DNA A2 , a peak at 10193 shows the conjugation of A2 and chlorambrucil
For MS-single stranded DNA A3 , a peak at 7043 shows the conjugation of A3 and folic acid
DNA extraction after folding of DNA origami
Gel photo :
Nanodrop Reading
DNA concentration : 5.5 ng/ul
260/280 : 2.65
260/230 : 1.12
Confocal Microscopy
Hep G2 Treatment
Hep G2 Control
HK-1 Treatment
HK-1 Control
Excitation : 405nm
Emission : 460 – 560nm
Emission Spectrum
Hep G2 HK-1