Barcodes

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Last week, with Heather's help, we ordered five sets of primers to '''finally''' test whether or not these barcodes work.  Remember that the original purpose of the barcodes was to be able to provide a qualitative screen for whether or not a uncharacterized biological sample contains any BioBricks (or not).  Nothing more fancy.
Last week, with Heather's help, we ordered five sets of primers to '''finally''' test whether or not these barcodes work.  Remember that the original purpose of the barcodes was to be able to provide a qualitative screen for whether or not a uncharacterized biological sample contains any BioBricks (or not).  Nothing more fancy.
-
The five primer sets are...
+
The five different primer sets are...
 +
 
 +
Barcode_A_for:
 +
5' TAG TGC TAG TGT AGA TCA C 3'
 +
Barcode_A_rev:
 +
5’ TAC ACT AGC ACT ATC AGA G 3'
 +
 
 +
Barcode_C_for:
 +
5' TAG TGC TAG TGT AGA TCC C 3'
 +
Barcode_C_rev:
 +
5' TAC ACT AGC ACT ATC AGC G 3'
 +
 
 +
Barcode_G_for:
 +
5' TAG TGC TAG TGT AGA TCG C  3'
 +
Barcode_G_rev:
 +
5' TAC ACT AGC ACT ATC AGG G 3'
 +
 
 +
Barcode_T_for:
 +
5' TAG TGC TAG TGT AGA TCT C 3'
 +
Barcode_T_rev:
 +
5' TAC ACT AGC ACT ATC AGT G 3'
 +
 
 +
Barcode_Internal_for:
 +
5' CTG ATA GTG CTA GTG TAG ATC 3'
 +
Barcode_Internal_rev:
 +
5' GAT CTA CAC TAG CAC TAT CAG 3'

Revision as of 20:42, 6 June 2005

"A long time ago, in a building far, far away..." Randy designed some fancy barcodes for our BioBricks. Here's the URL describing the original plan. We've been building all our new ORF parts with barcodes for the last couple years.

Last week, with Heather's help, we ordered five sets of primers to finally test whether or not these barcodes work. Remember that the original purpose of the barcodes was to be able to provide a qualitative screen for whether or not a uncharacterized biological sample contains any BioBricks (or not). Nothing more fancy.

The five different primer sets are...

Barcode_A_for: 5' TAG TGC TAG TGT AGA TCA C 3' Barcode_A_rev: 5’ TAC ACT AGC ACT ATC AGA G 3'

Barcode_C_for: 5' TAG TGC TAG TGT AGA TCC C 3' Barcode_C_rev: 5' TAC ACT AGC ACT ATC AGC G 3'

Barcode_G_for: 5' TAG TGC TAG TGT AGA TCG C 3' Barcode_G_rev: 5' TAC ACT AGC ACT ATC AGG G 3'

Barcode_T_for: 5' TAG TGC TAG TGT AGA TCT C 3' Barcode_T_rev: 5' TAC ACT AGC ACT ATC AGT G 3'

Barcode_Internal_for: 5' CTG ATA GTG CTA GTG TAG ATC 3' Barcode_Internal_rev: 5' GAT CTA CAC TAG CAC TAT CAG 3'

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