BME100 s2015:Group2 9amL4: Difference between revisions

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*HEATED LID: 100°C
*HEATED LID: 100°C
 
*INITIAL STEP: 95°C for 2 minutes  
INITIAL STEP: 95°C for 2 minutes  
*NUMBER OF CYCLES: 35
 
Denature at 95°C for 30 seconds, Anneal at 57°C for 30 seconds, and *Extend at 72°C for 30
NUMBER OF CYCLES: 35
 
Denature at 95°C for 30 seconds, Anneal at 57°C for 30 seconds, and Extend at 72°C for 30
seconds
seconds
 
*FINAL STEP: 72°C for 2 minutes
FINAL STEP: 72°C for 2 minutes
*FINAL HOLD: 4°C
 
FINAL HOLD: 4°C





Revision as of 20:12, 31 March 2015

BME 100 Spring 2015 Home
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Lab Write-Up 1 | Lab Write-Up 2 | Lab Write-Up 3
Lab Write-Up 4 | Lab Write-Up 5 | Lab Write-Up 6
Course Logistics For Instructors
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OUR TEAM

Ryan Bridges
Role(s)
Name: Michael Bejarano
Role(s)
Name: Virginia Fernandez
Role(s)
Morgan Johnson
Role(s)

LAB 4 WRITE-UP

Protocol

Materials

  • Lab coat and disposable gloves
  • PCR reaction mix, 8 tubes, 50 μL each: Mix contains Taq DNA polymerase, MgCl2, and dNTP’s (http://www.promega.com/resources/protocols/product-information-sheets/g/gotaqcolorless-master-mix-m714-protocol/)
  • DNA/primer mix, 8 tubes, 50 μL each: Each mix contains a different template DNA. All tubes have the same forward primer and reverse primer
  • A strip of empty PCR tubes
  • Disposable pipette tips: only use each only once. Never re-use disposable pipette tips or samples will be cross-contaminated
  • Cup for discarded tips
  • Micropipettor
  • OpenPCR machine: shared by two groups

PCR Reaction Sample List

Tube Label PCR Reaction Sample Patient ID
G2 + Positive control none
G2 - Negative control none
G2 1-1 Patient 1, replicate 1 15062
G2 1-2 Patient 1, replicate 2 15062
G2 1-3 Patient 1, replicate 3 15062
G2 2-1 Patient 2, replicate 1 95748
G2 2-2 Patient 2, replicate 2 95748
G2 2-3 Patient 2, replicate 3 95748


DNA Sample Set-up Procedure

  1. Step 1
  2. Step 2
  3. Step 3...


OpenPCR program

  • HEATED LID: 100°C
  • INITIAL STEP: 95°C for 2 minutes
  • NUMBER OF CYCLES: 35

Denature at 95°C for 30 seconds, Anneal at 57°C for 30 seconds, and *Extend at 72°C for 30 seconds

  • FINAL STEP: 72°C for 2 minutes
  • FINAL HOLD: 4°C





Research and Development

PCR - The Underlying Technology