BME100 s2015:Group15 12pmL4: Difference between revisions

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| G15 1-1 || Patient 1, replicate 1 || 50018  
| G15 1-1 || Patient 1, replicate 1 || 50018  
|-
|-
| G5 1-2 || Patient 1, replicate 2 || 50018
| G15 1-2 || Patient 1, replicate 2 || 50018
|-
|-
| G15 1-3 || Patient 1, replicate 3 || 50018
| G15 1-3 || Patient 1, replicate 3 || 50018
Line 67: Line 67:
# Step 1: Materials mentioned above are obtained from the professors
# Step 1: Materials mentioned above are obtained from the professors
# Step 2: Two lengths of four tubes should be created by cutting the provided linked tubes in half.  Tubes should be empty and will be used for the PCR reaction.
# Step 2: Two lengths of four tubes should be created by cutting the provided linked tubes in half.  Tubes should be empty and will be used for the PCR reaction.
# Step 3: The sides of the tubes should be labeled with a permanent marker
# Step 3: The sides of the tubes should be labeled with a permanent marker: G15 +, G15 -, G15 1-1, G15 1-2, G15 1-3, G15 2-1, G15 2-2, G15 2-3
# Step 4: ...
# Step 4: ...



Revision as of 12:57, 25 March 2015

BME 100 Spring 2015 Home
People
Lab Write-Up 1 | Lab Write-Up 2 | Lab Write-Up 3
Lab Write-Up 4 | Lab Write-Up 5 | Lab Write-Up 6
Course Logistics For Instructors
Photos
Wiki Editing Help


OUR TEAM

Name: Matt Birkholz
Name: Tyler McCluskey
Name: Kelsie Hermanson
Name: Jasilynn Cox
Name: student
Role(s)

LAB 4 WRITE-UP

Protocol

Materials

  • Lab coat and disposable gloves
  • PCR reaction mix, 8 tubes, 50 μL eachh: Mix contains Taq DNA polymerase, MgCl2, and dNTP’s

(http://www.promega.com/resources/protocols/product-information-sheets/g/gotaqcolorless-master-mix-m714-protocol/)

  • DNA/primer mix, 8 tubes, 50 μL each: Each mix contains a different template DNA. All tubes have the same forward primer and reverse primer
  • A strip of empty PCR tubes
  • Disposable pipette tips: only use each only once. Disposable pipette tips should never be reused or samples will be cross-contaminated
  • Cup for discarded tips
  • Micropipettor
  • OpenPCR machine: shared by two groups

PCR Reaction Sample List

Tube Label PCR Reaction Sample Patient ID
G15 + Positive control none
G15 - Negative control none
G15 1-1 Patient 1, replicate 1 50018
G15 1-2 Patient 1, replicate 2 50018
G15 1-3 Patient 1, replicate 3 50018
G15 2-1 Patient 2, replicate 1 69797
G15 2-2 Patient 2, replicate 2 69797
G15 2-3 Patient 2, replicate 3 69797


DNA Sample Set-up Procedure

  1. Step 1: Materials mentioned above are obtained from the professors
  2. Step 2: Two lengths of four tubes should be created by cutting the provided linked tubes in half. Tubes should be empty and will be used for the PCR reaction.
  3. Step 3: The sides of the tubes should be labeled with a permanent marker: G15 +, G15 -, G15 1-1, G15 1-2, G15 1-3, G15 2-1, G15 2-2, G15 2-3
  4. Step 4: ...


OpenPCR program






Research and Development

PCR - The Underlying Technology