BME100 s2014:Projects6: Difference between revisions

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=Lab 6:  “Fluorescence Detection of DNA”=
=Lab 6:  “Design of a New Molecular Diagnostic System”=
* '''Background Information''' <br>
* '''Computer-Aided Design'''
* '''Procedure''' <br>
* '''Feature 1: Disease SNP-Specific Primers'''
* '''Data Analysis''' <br><br>
* '''Feature 2: Consumables Kit'''
* '''Feature 3: Hardware - PCR Machine & Fluorimeter'''
<br><br>


'''HW: Lab Report 5 (due 04/16/14-Wed Section, 04/17/14-Thurs Section through OpenWetWare)'''<br><br>
'''HW: Lab Report 6 (due 04/23/14-Wed Section, 04/24/14-Thurs Section through OpenWetWare)'''<br><br>


'''Grading Scheme:'''<br>
'''Grading Scheme:'''<br>
8 points – Overall layout: Our Team section, grammar, style<br>
5 points – Overall layout: Our Company section, grammar, style<br>
14 points – Background Information: SYBR Green I dye, single-drop fluorimeter, fluorescence technique<br>
10 points - Computer-Aided Design - TinkerCAD, your design<br>
14 points – Procedure: camera settings, calibration & solutions used for calibration, placing samples onto the fluorimeter <br>
10 points – Feature 1: Disease SNP-Specific Primers - Background on the disease-associated mutation, primer design<br>
14 points – Data Analysis: representative images of samples, Image J values for all samples, fitting a straight line <br>
10 points – Feature 2: Consumables Kit - "Consumables" are items like reagents (PCR mix, primer solution, SYBR Green solution, buffer, etc.), plastic tubes, glass slides, etc.<br>
10 points – Feature 3: Hardware - PCR Machine & Fluorimeter<br>
5 points - Bayes Statistics Quiz: Your Bayesian statistics work must be submitted via an online quiz at Blackboard. Do not post your answers on Lab Report 6!<br>
50 points – Peer Assessment<br>
50 points – Peer Assessment<br>
'''Link: https://docs.google.com/a/asu.edu/forms/d/1DkRrNuw0L2Fsiz_Xcz8VZWRR_h9HqOYUEQhaA5cnw-A/viewform'''<br>


'''Link: https://docs.google.com/a/asu.edu/forms/d/1Ds8HBrjr0AMsZqLqLf6ZLzCkjf_RisGolf1PMGT9rag/viewform'''<br>
[[Image:BME100_Sp2014_Rubric_Lab6.png|800px|Lab 6 Rubric]]
 
 
[[Image:BME100_Sp2014_Rubric_Lab_5.png|800px|Lab 5 Rubric]]




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| [[BME100_s2014:W Group6 L6 | W Group6 L6]] || [[BME100_s2014:W Group7 L6 | W Group7 L6]] || [[BME100_s2014:W Group8 L6 | W Group8 L6]] || [[BME100_s2014:W Group9 L6 | W Group9 L6]] || [[BME100_s2014:W Group10 L6 | W Group10 L6]]  
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Latest revision as of 10:19, 23 April 2014

BME 100 Spring 2014 Home
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Lab Write-Up 1 | Lab Write-Up 2 | Lab Write-Up 3
Lab Write-Up 4 | Lab Write-Up 5 | Lab Write-Up 6
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Wiki Editing Help


Lab 6: “Design of a New Molecular Diagnostic System”

  • Computer-Aided Design
  • Feature 1: Disease SNP-Specific Primers
  • Feature 2: Consumables Kit
  • Feature 3: Hardware - PCR Machine & Fluorimeter



HW: Lab Report 6 (due 04/23/14-Wed Section, 04/24/14-Thurs Section through OpenWetWare)

Grading Scheme:
5 points – Overall layout: Our Company section, grammar, style
10 points - Computer-Aided Design - TinkerCAD, your design
10 points – Feature 1: Disease SNP-Specific Primers - Background on the disease-associated mutation, primer design
10 points – Feature 2: Consumables Kit - "Consumables" are items like reagents (PCR mix, primer solution, SYBR Green solution, buffer, etc.), plastic tubes, glass slides, etc.
10 points – Feature 3: Hardware - PCR Machine & Fluorimeter
5 points - Bayes Statistics Quiz: Your Bayesian statistics work must be submitted via an online quiz at Blackboard. Do not post your answers on Lab Report 6!
50 points – Peer Assessment
Link: https://docs.google.com/a/asu.edu/forms/d/1DkRrNuw0L2Fsiz_Xcz8VZWRR_h9HqOYUEQhaA5cnw-A/viewform

Lab 6 Rubric


Important Information About Grading: Any images that are copy-pasted from the BME 100 workbook, from another group's Wiki page, or from the internet* will count as plagiarism and will received zero credit. *Internet images (that are NOT from another group's Wiki report) may be used as long as the source is properly cited. Wiki pages are time-stamped after each "save". Only the version of your page that was saved by the deadline will be graded. Any changes made after the deadline will be ignored.



Wednesday

Look for your Group's lab report link in the list of links on the right. If it is red instead of blue, do not click on it!

If the link is red, type the name of your Group's lab report link exactly as shown in the following text field and click the Create Page button.

This should open up an Edit page that is pre-populated with a lab report template code.

<createbox> preload=Template:ASUBME103_s2014_L6 prefix=BME100_s2014: width=25 buttonlabel=Create Page </createbox>

W Group1 L6 W Group2 L6 W Group3 L6 W Group4 L6 W Group5 L6
W Group6 L6 W Group7 L6 W Group8 L6 W Group9 L6 W Group10 L6
W Group11 L6 W Group12 L6 W Group13 L6 W Group14 L6 W Group15 L6
W Group16 L6 W Group17 L6 W Group18 L6 W Group19 L6 W Group20 L6



Thursday

Look for your Group's lab report link in the list of links on the right. If it is red instead of blue, do not click on it!

If the link is red, type the name of your Group's lab report link exactly as shown in the following text field and click the Create Page button.

This should open up an Edit page that is pre-populated with a lab report template code.

<createbox> preload=Template:ASUBME103_s2014_L6 prefix=BME100_s2014: width=25 buttonlabel=Create Page </createbox>

T Group1 L6 T Group2 L6 T Group3 L6 T Group4 L6 T Group5 L6
T Group6 L6 T Group7 L6 T Group8 L6 T Group9 L6 T Group10 L6
T Group11 L6 T Group12 L6 T Group13 L6 T Group14 L6 T Group15 L6
T Group16 L6 T Group17 L6 T Group18 L6 T Group19 L6 T Group20 L6




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