Van Oudenaarden Lab:F22A3.5
Progress:
Probes designed: (03-01-2010 - Alexander van Oudenaarden)
Probes coupled:
Probes purified:
Probes tested:
Dyes available:
>F22A3.5 (ceh-60 spliced coding region)
agacacatcacagctctgtgttgttgcgttcacaaccgagtgcatcacaccgatctttgagag
atggataatcttattaagcagctccaaatgagcgtctcaagtgaaaacgtcgacaggaattttattgaaaaatgcatcga aatgaatccctgtcgccggatgcttcacgaagtgctacttgaaagaaaagacattttacgctctcggatgaacttggttg cgttgtatgatacagatgaacaatcctccgaaattgaggaaattctcgctcaattcgaaaatcctacatttccgttggaa gaggtcaacactgagaaagacgaggaatggcaacccttagaaaggaaatatttggacggaattaaccgtataaaagaaga cactatcatgaaacaaattcaactggacaaggatatggaaaaagccctgactaatagcgaagaagtactcagaaatcatc gcgattttagaccgatcgacgaaaaggatttctctaacattcggcaaagcatttccaaaaggttcgagcattcgaaaaat aacattcgcggggaggcagcaactaaaattctagttctccggagggagatcgagcagcagggacgcaagcgccggaactt tgacaaaaacacgacggacattttgcaaaactggttccacgatcatcgtcaaaatccttacccgtccgaccaggaaaagg cggaattagcaaaacagtgtaatatcaaaatttcacaggttaacaattggtttggaaatcaacgaattcggacaaaacaa caagctttgcgtatgcaagaagatgaacgtgaaagagctgcatcaatggctaacgaagcacaagcaattcagaattcttt gaacagttctacggttgcatcttcgtcgaatatgagcacatcggggctcattaacattccgctggttaacccaacaatgc aatcaatggtaattcctgcagtgcaaccaggcctacttggcaatccaaacggtcagttataa
Name of probe set: ceh-60 Probes designed on Mon, 01 Mar 10 13:51:37 -0700 45 probes designed for target of length 1005 (target too short for 48 probes)
Probe (5'->3'), Probe name, Probe number, Probe position, Percent GC
cacagagctgtgatgtgtct, ceh-60_1, 1, 1, 50
cactcggttgtgaacgcaac, ceh-60_2, 2, 23, 55
tctctcaaagatcggtgtga, ceh-60_3, 3, 45, 45
agctgcttaataagattatc, ceh-60_4, 4, 67, 30
ttcacttgagacgctcattt, ceh-60_5, 5, 89, 40
caataaaattcctgtcgacg, ceh-60_6, 6, 111, 40
ggattcatttcgatgcattt, ceh-60_7, 7, 133, 35
ttcgtgaagcatccggcgac, ceh-60_8, 8, 155, 60
tgtcttttctttcaagtagc, ceh-60_9, 9, 177, 35
aagttcatccgagagcgtaa, ceh-60_10, 10, 199, 45
catctgtatcatacaacgca, ceh-60_11, 11, 222, 40
tcctcaatttcggaggattg, ceh-60_12, 12, 244, 45
gattttcgaattgagcgaga, ceh-60_13, 13, 267, 40
acctcttccaacggaaatgt, ceh-60_14, 14, 289, 45
ttcctcgtctttctcagtgt, ceh-60_15, 15, 311, 45
atttcctttctaagggttgc, ceh-60_16, 16, 333, 40
atacggttaattccgtccaa, ceh-60_17, 17, 355, 40
gtttcatgatagtgtcttct, ceh-60_18, 18, 378, 35
catatccttgtccagttgaa, ceh-60_19, 19, 401, 40
cgctattagtcagggctttt, ceh-60_20, 20, 423, 45
cgatgatttctgagtacttc, ceh-60_21, 21, 445, 40
ttcgtcgatcggtctaaaat, ceh-60_22, 22, 467, 40
gccgaatgttagagaaatcc, ceh-60_23, 23, 489, 45
ctcgaaccttttggaaatgc, ceh-60_24, 24, 512, 45
cgcgaatgttatttttcgaa, ceh-60_25, 25, 534, 35
agaattttagttgctgcctc, ceh-60_26, 26, 556, 40
ctcgatctccctccggagaa, ceh-60_27, 27, 578, 60
ttccggcgcttgcgtccctg, ceh-60_28, 28, 601, 70
gtccgtcgtgtttttgtcaa, ceh-60_29, 29, 623, 45
cgtggaaccagttttgcaaa, ceh-60_30, 30, 645, 45
gggtaaggattttgacgatg, ceh-60_31, 31, 667, 45
attccgccttttcctggtcg, ceh-60_32, 32, 690, 55
ttgatattacactgttttgc, ceh-60_33, 33, 712, 30
ccaattgttaacctgtgaaa, ceh-60_34, 34, 734, 35
gtccgaattcgttgatttcc, ceh-60_35, 35, 757, 45
catacgcaaagcttgttgtt, ceh-60_36, 36, 779, 40
ctctttcacgttcatcttct, ceh-60_37, 37, 801, 40
gcttcgttagccattgatgc, ceh-60_38, 38, 823, 50
caaagaattctgaattgctt, ceh-60_39, 39, 845, 30
aagatgcaaccgtagaactg, ceh-60_40, 40, 867, 45
cccgatgtgctcatattcga, ceh-60_41, 41, 889, 50
aaccagcggaatgttaatga, ceh-60_42, 42, 911, 40
ccattgattgcattgttggg, ceh-60_43, 43, 933, 45
cctggttgcactgcaggaat, ceh-60_44, 44, 955, 55
accgtttggattgccaagta, ceh-60_45, 45, 977, 45
