Van Oudenaarden Lab:F17A2.5
Progress:
Probes designed: (03-01-2010 - Alexander van Oudenaarden)
Probes coupled:
Probes purified:
Probes tested:
Dyes available:
>F17A2.5 (ceh-40 spliced coding region)
atgagtgaggcgtcaaaatcgattatggatctgctgtcagaagttgtcaaaattaccgacatgactatggataatgaagc tgtcaataaattaaaaccacaaatcaagatcaatccattctaccgagccgtacaagatgttctagttgagcagaagtcca aaatcgacctatcgacaaagatgatgaaggatcttgaagcacaagagaatgatgaacggctggataccatgctcaaagca gaaggagttgctggacccgatgatagtttgttgcgtattcaggaagctgctggaactgaccaatacgagtatcgtcaaca acttttgaaagtgagacgagagcttgaaaatgagacaaaagcgtttgacaagcactgcaaaaagtggtgtgagtacgttg aagatgttctccagcaacaaggagaattccgtccaatcacccaacagtcaaccgaaaagtttatgaacaagatgtccggt aaatttaacaaggtctgttttgtactaaaacagactgcctgcgaagaagttatccaactgaaaaagcgttatctggatgc tcgtcgaaagagaagaaatttctcgaaaacttccaccgagattctcaacgagtacttcctagcaaacatcaatcatccat acccgtcggaagaggtcaaacaggccttagctatgcaatgtaacattagtgttgctcaggtatcaaactggtttggaaat aagcgaattcgctacaagaaaacaatggctaagaatgaggatgaaagaagagaaaacagaaaaccagaagatcgccctcc gcctggagctcctggagctccgtatagtctggtacccaacgcgtttgcaggaatgatgaacccatatcagatgatgttac ctggtcatcaatttcccatcggtgttgcccctttcaatttttccatgtacaatcctgagatgatggcccaatatcaacag tctctacaaaacccaaatcaaactcgatga
caaactttaataatgctgg tactgagtactcattcatacatttgccatgatgttataaagtaataaattcattgaaataca
Name of probe set: ceh-40
Probes designed on Mon, 01 Mar 10 13:35:03 -0700
48 probes designed for target of length 1071
Probe (5'->3'), Probe name, Probe number, Probe position, Percent GC
gattttgacgcctcactcat, ceh-40_1, 1, 1, 45
cttctgacagcagatccata, ceh-40_2, 2, 24, 45
gtcatgtcggtaattttgac, ceh-40_3, 3, 46, 40
attgacagcttcattatcca, ceh-40_4, 4, 68, 35
gatcttgatttgtggtttta, ceh-40_5, 5, 92, 30
gtacggctcggtagaatgga, ceh-40_6, 6, 114, 55
ttctgctcaactagaacatc, ceh-40_7, 7, 136, 40
tgtcgataggtcgattttgg, ceh-40_8, 8, 158, 45
cttcaagatccttcatcatc, ceh-40_9, 9, 180, 40
agccgttcatcattctcttg, ceh-40_10, 10, 202, 45
ttctgctttgagcatggtat, ceh-40_11, 11, 224, 40
tatcatcgggtccagcaact, ceh-40_12, 12, 246, 50
gcttcctgaatacgcaacaa, ceh-40_13, 13, 268, 45
ctcgtattggtcagttccag, ceh-40_14, 14, 290, 50
ctttcaaaagttgttgacga, ceh-40_15, 15, 312, 35
tcattttcaagctctcgtct, ceh-40_16, 16, 334, 40
gtgcttgtcaaacgcttttg, ceh-40_17, 17, 356, 45
cgtactcacaccactttttg, ceh-40_18, 18, 378, 45
tgttgctggagaacatcttc, ceh-40_19, 19, 400, 45
ggtgattggacggaattctc, ceh-40_20, 20, 422, 50
taaacttttcggttgactgt, ceh-40_21, 21, 444, 35
aatttaccggacatcttgtt, ceh-40_22, 22, 466, 35
tagtacaaaacagaccttgt, ceh-40_23, 23, 488, 35
aacttcttcgcaggcagtct, ceh-40_24, 24, 512, 50
gataacgctttttcagttgg, ceh-40_25, 25, 534, 40
cttctctttcgacgagcatc, ceh-40_26, 26, 556, 50
ggtggaagttttcgagaaat, ceh-40_27, 27, 578, 40
ggaagtactcgttgagaatc, ceh-40_28, 28, 600, 45
tatggatgattgatgtttgc, ceh-40_29, 29, 622, 35
ctgtttgacctcttccgacg, ceh-40_30, 30, 644, 55
tgttacattgcatagctaag, ceh-40_31, 31, 666, 35
tttgatacctgagcaacact, ceh-40_32, 32, 688, 40
aattcgcttatttccaaacc, ceh-40_33, 33, 710, 35
tagccattgttttcttgtag, ceh-40_34, 34, 732, 35
tctcttctttcatcctcatt, ceh-40_35, 35, 754, 35
gcgatcttctggttttctgt, ceh-40_36, 36, 776, 45
ctccaggagctccaggcgga, ceh-40_37, 37, 798, 70
ttgggtaccagactatacgg, ceh-40_38, 38, 820, 50
gttcatcattcctgcaaacg, ceh-40_39, 39, 842, 45
caggtaacatcatctgatat, ceh-40_40, 40, 864, 35
acaccgatgggaaattgatg, ceh-40_41, 41, 886, 45
catggaaaaattgaaagggg, ceh-40_42, 42, 908, 40
tgggccatcatctcaggatt, ceh-40_43, 43, 931, 50
gggttttgtagagactgttg, ceh-40_44, 44, 955, 45
agtttgtcatcgagtttgat, ceh-40_45, 45, 977, 35
gagtactcagtaccagcatt, ceh-40_46, 46, 1002, 45
acatcatggcaaatgtatga, ceh-40_47, 47, 1024, 35
tcaatgaatttattacttta, ceh-40_48, 48, 1046, 15
