User:Morgan G. I. Langille/Notebook/Unknown Genes/2010/09/27

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PFAM Sorenson Similarity vs PFAM2GO Functional Similarity

  • After filtering out the pfam rows with low counts I reran the functional similarity analysis using GO SESAME.
  • I plotted the Sorenson similarity vs the functional similarity distances.
    • Results were not very good (cor=0.018)
    • Here is the pdf of the simple plot