01/21/10
- ✓ Western blot: Polycomb-ATF lines, check size of fusion protein w/ anti-myc
Western blot
> Bradford assay
--> Calculate amount of protein to load in each lane (6 μL max)
> SDS-PAGE
--> Bring protein vol. up to 6μL w/ dH2O
--> Make 100 mM DTT in 2x loading buffer (200 μL total; > enough for 6 μL/ gel lane)
--> Add 6 μL DTT + buffer to each protein sample
--> Incubate at 100°C/ 5 min.
--> Gel loading:
Gel #1
- Protein marker
- KAH126-1
- KAH126-3
- KAH126-4
- KAH127-3
- KAH127-4
- KAH127-7
- KAH128-2
- KAH128-6
- KAH128-8
- KAH129-3
- KAH129-4
- KAH129-8
- KAH126-7 no Dox (neg. ctrl)
- Protein marker
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Gel #2
- Protein marker
- KAH130-2
- KAH130-7
- KAH131-1
- KAH131-6
- KAH131-9
- KAH132-4
- KAH132-6
- KAH132-8
- KAH133-1
- KAH133-2
- KAH133-6
- KAH126-7 no Dox (neg. ctrl)
- Protein marker
- 1x loading buffer
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> Immunostaining
--> Primary: mouse anti-myc, 1:5000 (4°C/ over night)
--> Secondary: donkey anti-mouse-HRP, 1:10,000 (R.T./ 1 hr.)
--> KAH133 (mCherry-only constructs) look good
--> Repeat this expt. for all others (seed 12-well plates for new protein preps)
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