User:J.M. Sun

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Contact Info

J.M. Sun (an artistic interpretation)

I work in the Your Lab at Lund University. I learned about OpenWetWare from google, and I've joined because open to the world.

Education

  • 2012, PhD, Tongji Univ
  • 2008, MS, Tongji Univ
  • 2005, BS, Tongji Univ

Research interests

  1. Data ming and machine learning
  2. General problems in biology
  3. NGS

Publications

  1. Hu Y, Li T, Sun J, Tang S, Xiong W, Li D, Chen G, and Cong P. Predicting gram-positive bacterial protein subcellular localization based on localization motifs. J Theor Biol. 2012 Sep 7;308:135-40. DOI:10.1016/j.jtbi.2012.05.031 | PubMed ID:22683368 | HubMed [Paper1]
  2. Sun J, Tang S, Xiong W, Cong P, and Li T. DSP: a protein shape string and its profile prediction server. Nucleic Acids Res. 2012 Jul;40(Web Server issue):W298-302. DOI:10.1093/nar/gks361 | PubMed ID:22553364 | HubMed [Paper2]
  3. Li D, Li T, Cong P, Xiong W, and Sun J. A novel structural position-specific scoring matrix for the prediction of protein secondary structures. Bioinformatics. 2012 Jan 1;28(1):32-9. DOI:10.1093/bioinformatics/btr611 | PubMed ID:22065541 | HubMed [Paper3]
  4. Tang Z, Li T, Liu R, Xiong W, Sun J, Zhu Y, and Chen G. Improving the performance of β-turn prediction using predicted shape strings and a two-layer support vector machine model. BMC Bioinformatics. 2011 Jul 13;12:283. DOI:10.1186/1471-2105-12-283 | PubMed ID:21749732 | HubMed [Paper4]
  5. Qiao Q, Li T, Sun J, Liu X, Ren J, and Fei J. Metabolomic analysis of normal (C57BL/6J, 129S1/SvImJ) mice by gas chromatography-mass spectrometry: detection of strain and gender differences. Talanta. 2011 Jul 15;85(1):718-24. DOI:10.1016/j.talanta.2011.04.060 | PubMed ID:21645764 | HubMed [Paper5]
  6. Zhu Y, Li T, Li D, Zhang Y, Xiong W, Sun J, Tang Z, and Chen G. Using predicted shape string to enhance the accuracy of γ-turn prediction. Amino Acids. 2012 May;42(5):1749-55. DOI:10.1007/s00726-011-0889-z | PubMed ID:21424809 | HubMed [Paper6]
  7. Sun J, Li T, Cong P, Xiong W, Tang S, and Zhu L. Direct decomposition of three-way arrays using a non-negative approximation. Talanta. 2010 Dec 15;83(2):541-8. DOI:10.1016/j.talanta.2010.09.035 | PubMed ID:21111171 | HubMed [Paper7]
  8. Sun JM, Li TH, Cong PS, Tang SN, and Xiong WW. Retrieving backbone string neighbors provides insights into structural modeling of membrane proteins. Mol Cell Proteomics. 2012 Jul;11(7):M111.016808. DOI:10.1074/mcp.M111.016808 | PubMed ID:22415040 | HubMed [Paper8]
  9. Tang SN, Sun JM, Xiong WW, Cong PS, and Li TH. Identification of the subcellular localization of mycobacterial proteins using localization motifs. Biochimie. 2012 Mar;94(3):847-53. DOI:10.1016/j.biochi.2011.12.003 | PubMed ID:22182488 | HubMed [Paper9]
  10. Xiao YP, Wu TX, Hong QH, Sun JM, Chen AG, Yang CM, and Li XY. Response to weaning and dietary L-glutamine supplementation: metabolomic analysis in piglets by gas chromatography/mass spectrometry. J Zhejiang Univ Sci B. 2012 Jul;13(7):567-78. DOI:10.1631/jzus.B1100343 | PubMed ID:22761248 | HubMed [Paper10]
All Medline abstracts: PubMed | HubMed

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