User:Grant Shoffner/Notebook/BioE144L Protein Project/2010/10/21
|BioE144L Protein Project||Main project page|
Possible Target Proteins
Putative helicase from the parasitic protist Trypanosoma cruzi. No good, pdb structures within tolerance.
Non-structural protein 1 from Human rotavirus A.
Possible reverse transcriptase from Trypanosoma cruzi. No close pdb structures and few homologs (rough PSI-BLAST search).
Soybean sequence with almost no PDB hits. "late elongated hypocotyl and circadian clock associated-1-like protein 2"
Only a few short PDB matches with E>1, and one CDD match to a Transposase domain over a short region.
One good PDB structure to a portion of the sequence, and several CDD hits.