User:Carl Boettiger/Notebook/Comparative Phylogenetics/2010/05/31

Comparative Phylogenetics

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CSGF Survey Wrote survey. Getting feedback and will send out this week. previous comments Wiki Tricks Exploring use of mvs to download and upload entries from openwetware. The mediawiki client is easy to install as described in the link. Doesn't seem to have a tool to grab everything in my Notebook namespace, but with a little bash script I can grab all the entries in a particular notebook: <syntaxhighlight lang="bash"> ! /bin/bash mvs login -d openwetware.org -u Carl_Boettiger -w index.php for j in `seq 3 5`; { for i in `seq 1 9`; do mvs update User\:Carl_Boettiger/Notebook/Comparative_Phylogenetics/2010/0$j/0$i.wiki done for i in `seq 10 31`; do mvs update User\:Carl_Boettiger/Notebook/Comparative_Phylogenetics/2010/0$j/$i.wiki done } </syntaxhighlight> login should specify -p password (omitted here for obvious reasons) For some reason can't get commit to push changes back up. (See the link above for examples on how to commit data). Error: Doing commit User:Carl_Boettiger.wiki with host: openwetware.org and lang: en Can't call method "isa" without a package or object reference at /usr/bin/mvs line 96. Also looking into a personal copy of OWW: OpenWetWare:Software/Subwikis, which would similarly allow offline work.