6/25/10
12:40 PM
inoculated 5 mL broth with colonies from yesterday's biobrick plates. 37°C room to incubate
PCR
PCR of Plasmid Backbone
Component
|
20ul Rxn
|
6x Master Mix
|
10x Buffer
|
2ul |
12ul
|
10mM dNTP
|
--- |
---
|
F Primer (52358135)
|
1ul (10uM) |
6ul
|
R Primer (52358136)
|
1ul (10uM) |
6ul
|
Template DNA (Plamsid Backbone)
|
.5ul (~~250ng) |
(3)
|
Pfu Turbo DNA Pol
|
0.2ul |
1.2ul
|
dH2O
|
15.3ul |
91.8ul
|
PCR Program Used
95 degC
|
5 min
|
95 degC
|
30 sec |
32 cycles
|
55 degC
|
30 sec |
32 cycles
|
72 degC
|
270 sec |
32 cycles
|
72 degC
|
5 min
|
4 degC
|
hold
|
Miniprep of Parts for Backbones
Minipre of BB Plasmids for Backbone
Biobrick Part
|
Backbone
|
Concentration in ng/ul
|
Label
|
RFP |
pSB1A2 |
430 |
A
|
RFP |
pSB1C3 |
513 |
C
|
RFP |
pSB1T3 |
428 |
T
|
E0034 |
pSB2K3 |
268 |
K
|
Gel
Lane |
Sample |
Amount |
1. |
1 Kb Ladder |
3 ul |
2. |
A |
10 ul sample, 2 ul dye |
3. |
C |
10 ul sample, 2 ul dye |
4. |
T |
10 ul sample, 2 ul dye |
5. |
K |
10 ul sample, 2 ul dye |
6. |
A' |
10 ul sample, 2 ul dye |
7. |
C' |
10 ul sample, 2 ul dye |
8. |
T' |
10 ul sample, 2 ul dye |
9. |
K' |
10 ul sample, 2 ul dye |
10. |
negative control |
10 ul sample, 2 ul dye |
Ran at 175V
10:10 PM
Moved inoculations from this afternoon (12:40) from 37°C room to 4°C room.
|