IGEM:University of Chicago/2009/Notebook/Paraoxon Biosensor/2009/07/13
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Entry titleJuly 13th, 2009Section 1. Qubit Fluorometer Assay for Nora's DNA (not PNP-biosensor project) Notes: DNA concentration in ug/ml. Used protocol as instructed by invitrogen Qubit card. Replaced reagents into Fridge, not Freezer (?) Tube # 1. name = 346, DNAconc = 212 2. name = 236, DNAconc = 222 3. name = 213, DNAconc = 228 4. name = 186, DNAconc = 173.6 5. name = 49, DNAconc = 222 6. name = 139, DNAconc = 252 7. name = 35, DNAconc = 208 Finished section at 12:45 pm Section 2: start at 3:30 pm Primers Dilution -reconstitute to 100 uM; dilute to 5 uM 1. YGL205WF -> 17.02 nmoles, TE buffer = 100 uM, Amount TE = 170.2 uL YGL205WR -> 19.50 nmoles, TE buffer = 100 uM, Amount TE = 195.0 uL YJL219WF -> 9.35 nmoles, TE buffer = 100 uM, Amount TE = 93.5 ul 2. YJL219WR -> 19.50 nmoles, TE buffer = 100 uM, Amount TE = 195.0 uL YGR287CF -> 12.09 nmoles, TE buffer = 100 uM, Amount TE = 120.9 uL 3. YGR287CR -> 19.76 nmoles, TE buffer = 100 uM, Amount TE = 197.6 uL YHL012WF -> 15.40 nmoles, TE buffer = 100 uM, Amount TE = 197.6 uL 4. YHL012WR -> 15.72 nmoles, TE buffer = 100 uM, Amount TE = 157.2 uL YDL243CF -> 15.34 nmoles, TE buffer = 100 uM, Amount TE = 153.4 uL 5. YDL243CR -> 16.96 nmoles, TE buffer = 100 uM, Amount TE = 169.6 uL Note: Saved invitrogen data sheets about these primers. They can be found in the white binder in our lab Completed dilutions in primer screwtops PCR
Template DNA: PFA6alpha GFP/Histag Primers: See above (07-14 at 3:30) IGEM 6 conditions : See PCR machine. Start Time: 6:00 p.m. End Time: 10:30 pm 2 beads 0.65 uL template 5 ul of 5 uM primers 37.35 uL H2O
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