An Arabidopsis transcription factor-gene regulatory network as quantitatively deduced by network component analysis. Directions and control strengths of connections between 10 transcription factors (TFs) (lilac) important in Arabidopsis floral development and their 57 target genes (light blue), as quantitatively deduced by network component analysis. Edges from TFs to genes indicate target genes of TFs: a solid green edge with an arrow indicates gene activation by a TF, a dashed red edge with an arrow indicates gene repression by a TF and gray solid edges edges indicate an unknown interaction. Edge thickness is proportional to the TF-gene control strengths deduced by NCA. The gene abbreviations and the corresponding Arabidopsis gene model are as follows: 1 - NAP (At1g69490), 2 - CRC (At1g69180), 3 - GIK (At2g35270), 4 - APL (At2g27330), 5 - AGL2 (At5g15800), 6 - AGL4 (At3g02310), 7 - AGL8 (At5g60910), 8 - AGL3 (At2g03710), 9 - ACS8 (At4g37770), 10 - ADR1 (At1g33560), 11 - INV1 (At1g02810), 12 - UNK4 (At1g56660), 13 - FAD bin (At1g57770), 14 - UNK5 (At2g25460), 15 - UNK6 (At2g25890), 16 - AP1 (At1g69120), 17 - FLO10 (At3g23130), 18 - AG (At4g18960), 19 - AGL5 (At2g42830), 20 - AGL1 (At3g58780), 21 - HLH1 (At2g42870), 22 - RD20 (At2g33380), 23 - EDF4 (At1g13260), 24 - AGL22 (At2g22540), 25 - RAV2 (At1g68840), 26 - ACR7 (At4g22780), 27 - ASN1 (At3g47340), 28 - BGLU15 (At2g44450), 29 - BZIP (At1g68880), 30 - AGL10 (At1g26310), 31 - UNK1 (At5g03230), 32 - LEA (At3g52470), 33 - UNK2 (At1g61830), 34 - LEU1 (At5g49770), 35 - HB51 (At5g03790), 36 - GRA1 (At3g19390), 37 - UNK3 (At5g60630), 38 - MYB17 (At3g61250), 39 - SUS4 (At3g43190), 40 - TLP8 (At1g16070), 41 - APUM9 (At1g35730), 42 - DAN1 (At3g04620), 43 - KIN1 (At1g11050), 44 - AGL44 (At2g14210), 45 - PERK4 (At2g18470), 46 - DNA1 (At3g47680), 47 - PKS2 (At1g14280), 48 - AGL25 (At5g10140), 49 - FUS3 (At3g26790), 50 - IAA30 (At3g62100), 51 - LEC2 (At1g28300), 52 - ATGA2OX4 (At1g02400), 53 - LEA7 (At1g52690), 54 - CSP4 (At2g21060), 55 - AGL18 (At3g57390), 56 - DTA2 (At2g45830), 57 - CBF2 (At4g25470). For more detail, see our publication.
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|current||18:30, 14 June 2014||1,259 × 766 (160 KB)||Ganesh Sriram||[[<b>An Arabidopsis transcription factor-gene regulatory network as quantitatively deduced by network component analysis.</b> Directions and control strengths of connections between 10 transcription factors (TFs) (lilac) important in Arabidopsis floral de|
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|1,259 × 766 (160 KB)||Ganesh Sriram||From: Misra A, Sriram G: Network component analysis provides quantitative insights on an Arabidopsis transcription factor-gene regulatory network. BMC Systems Biology 2013, 7:126. *'''~~~~''':|
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