Zrusso Biol 368 week 12
Experiment E-BUG Data
Week 12 Assignment
- What samples did they collect and use for the microarray experiment?
- 3 replicates of control culture and ranalexin were used in the microarray experiment. 6 total arrays were used in analysis.
- How many microarray chips did they hybridize in the experiment?
- 2 microarray chips were used.
- Which samples were paired to hybridize on the chip?
- Ranalexin (A1) and MRSA-252(A2). MRSA-252(A1) and Ranalexin(A2).
- Which was labeled red (Cy5)? Which was labeled green (Cy3)?
- Ranalexin (A1) and MRSA-252(A2) was labeled red (Cy5). Ranalexin (A2) and MRSA-252(A1) was labeled green (Cy3).
- How many replicates did they perform of each type?
- 2 technical replicates of each type.
- Arrary data file names
- Ranalexin (A1) - MBAD_12054.txt
- Ranalexin (A2) - MBAD_12061.txt
- MRSA-252 (A1) - MBAD_12055.txt
- MRSA-252 (A2) - MBAD_12060.txt
- Spreadsheet can be found here.