Difference between revisions of "Wikiomics:NGS error correction"

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Latest revision as of 11:55, 2 July 2012

Error correcting software (Illumina oriented)


Coral

web: http://www.cs.helsinki.fi/u/lmsalmel/coral/ version: 1.4

Comments: easy to install and run. Long running time with larger datasets. RAM hungry.


Quake

web: http://www.cbcb.umd.edu/software/quake/ version: 0.3

Comments: problematic to run on in-house data.

Reptile

web: http://aluru-sun.ece.iastate.edu/doku.php?id=reptile version: 1.1 Untested


Qamar

web: http://sourceforge.net/projects/dnascissor/files/Qamar/ version: 1.0

HiTEC

web: http://www.csd.uwo.ca/~ilie/HiTEC/