Difference between revisions of "User:Viswanadham Sridhara"

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==Education==
 
==Education==
 
<!--Include info about your educational background-->
 
<!--Include info about your educational background-->
* 2012, Post-doc, Computational Biology, [[http://www.ncbi.nlm.nih.gov/Structure/structure_research.html NCBI]], NIH
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* 2012, Post-doc, Computational Biology, [[http://www.ncbi.nlm.nih.gov/Structure/structure_research.html NCBI Structure Group]], NIH
 
* 2007, PhD, Electrical and Computer Engineering, Old Dominion University
 
* 2007, PhD, Electrical and Computer Engineering, Old Dominion University
 
* 2003, MS,  Electrical and Computer Engineering, Old Dominion University
 
* 2003, MS,  Electrical and Computer Engineering, Old Dominion University
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==Research interests==
 
==Research interests==
 
<!-- Feel free to add brief descriptions to your research interests as well -->
 
<!-- Feel free to add brief descriptions to your research interests as well -->
# OMICS Data Analysis using Metabolic Reconstructions
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# OMICS Data Analysis using Genome-based Metabolic Networks
 
# Mass-Spectrometry based Proteomics/Metabolomics
 
# Mass-Spectrometry based Proteomics/Metabolomics
 
# Molecular Dynamics Simulations
 
# Molecular Dynamics Simulations
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#Paper6 pmid=16890913
 
#Paper6 pmid=16890913
 
#Paper7 pmid=15903466
 
#Paper7 pmid=15903466
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#Papers [[http://scholar.google.com/citations?user=UBvhRHgAAAAJ&hl=en List of all publications]]
 
</biblio>
 
</biblio>
  
 
==Useful links==
 
==Useful links==
 
*[[http://www.ncbi.nlm.nih.gov/pubmed/ PUBMED]]
 
*[[http://www.ncbi.nlm.nih.gov/pubmed/ PUBMED]]

Revision as of 20:16, 24 April 2013

I am a new member of OpenWetWare!

Contact Info

Viswanadham Sridhara (an artistic interpretation)

I work both at [CCBB] and in [Wilke Lab] at The University of Texas at Austin.

Education

  • 2012, Post-doc, Computational Biology, [NCBI Structure Group], NIH
  • 2007, PhD, Electrical and Computer Engineering, Old Dominion University
  • 2003, MS, Electrical and Computer Engineering, Old Dominion University

Research interests

  1. OMICS Data Analysis using Genome-based Metabolic Networks
  2. Mass-Spectrometry based Proteomics/Metabolomics
  3. Molecular Dynamics Simulations

Publications

  1. Sridhara V, Bai DL, Chi A, Shabanowitz J, Hunt DF, Bryant SH, and Geer LY. Increasing peptide identifications and decreasing search times for ETD spectra by pre-processing and calculation of parent precursor charge. Proteome Sci. 2012 Feb 9;10(1):8. DOI:10.1186/1477-5956-10-8 | PubMed ID:22321509 | HubMed [Paper1]
  2. Sridhara V, Marchler-Bauer A, Bryant SH, and Geer LY. Automatic annotation of experimentally derived, evolutionarily conserved post-translational modifications onto multiple genomes. Database (Oxford). 2011;2011:bar019. DOI:10.1093/database/bar019 | PubMed ID:21571812 | HubMed [Paper2]
  3. Garner AL, Chen G, Chen N, Sridhara V, Kolb JF, Swanson RJ, Beebe SJ, Joshi RP, and Schoenbach KH. Ultrashort electric pulse induced changes in cellular dielectric properties. Biochem Biophys Res Commun. 2007 Oct 12;362(1):139-44. DOI:10.1016/j.bbrc.2007.07.159 | PubMed ID:17706595 | HubMed [Paper3]
  4. Joshi RP, Nguyen A, Sridhara V, Hu Q, Nuccitelli R, Beebe SJ, Kolb J, and Schoenbach KH. Simulations of intracellular calcium release dynamics in response to a high-intensity, ultrashort electric pulse. Phys Rev E Stat Nonlin Soft Matter Phys. 2007 Apr;75(4 Pt 1):041920. DOI:10.1103/PhysRevE.75.041920 | PubMed ID:17500934 | HubMed [Paper4]
  5. Pliquett U, Joshi RP, Sridhara V, and Schoenbach KH. High electrical field effects on cell membranes. Bioelectrochemistry. 2007 May;70(2):275-82. DOI:10.1016/j.bioelechem.2006.10.004 | PubMed ID:17123870 | HubMed [Paper5]
  6. Joshi RP, Sridhara V, and Schoenbach KH. Microscopic calculations of local lipid membrane permittivities and diffusion coefficients for application to electroporation analyses. Biochem Biophys Res Commun. 2006 Sep 22;348(2):643-8. DOI:10.1016/j.bbrc.2006.07.144 | PubMed ID:16890913 | HubMed [Paper6]
  7. Hu Q, Viswanadham S, Joshi RP, Schoenbach KH, Beebe SJ, and Blackmore PF. Simulations of transient membrane behavior in cells subjected to a high-intensity ultrashort electric pulse. Phys Rev E Stat Nonlin Soft Matter Phys. 2005 Mar;71(3 Pt 1):031914. DOI:10.1103/PhysRevE.71.031914 | PubMed ID:15903466 | HubMed [Paper7]
  8. [Papers]

All Medline abstracts: PubMed | HubMed

Useful links