User:ShawnDouglas/scripts: Difference between revisions
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*[[/toehold.py]] - given input sequence generate N-mers orthogonal (to seq and its complement) to be used as toeholds | *[[/toehold.py]] - given input sequence generate N-mers orthogonal (to seq and its complement) to be used as toeholds | ||
*[[/hexgui.py]] - Tk GUI for honeycomb lattice program | *[[/hexgui.py]] - Tk GUI for honeycomb lattice program | ||
'''Misc''' | |||
*replace mac return character (\015) with unix return (\015\012) | |||
<pre>cat file | tr '\r' '\n'</pre> | |||
Revision as of 07:41, 27 June 2006
PCR
- /make-pcr-oligos.py - given target sequence, generate oligos that can be used for PCR assembly of that sequence
- /random-sequence.py - generate random DNA sequence of specified length
- /primer.py - given upstream and downstream sense sequence of region to amplify, print out correct primers
Nanostructures
- /toehold.py - given input sequence generate N-mers orthogonal (to seq and its complement) to be used as toeholds
- /hexgui.py - Tk GUI for honeycomb lattice program
Misc
- replace mac return character (\015) with unix return (\015\012)
cat file | tr '\r' '\n'
