Difference between revisions of "User:Margarida Gama-Carvalho"

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*Margarida Gama-Carvalho
 
*Margarida Gama-Carvalho
*Assistant Professor, Faculty of Medicine, University of Lisbon
+
*Assistant Professor, Faculty of Sciences, Dept. of Chemistry and Biochemistry, University of Lisbon
 
*BioFIG - Center for Functional and Integrative Genomics, Faculty of Sciences
 
*BioFIG - Center for Functional and Integrative Genomics, Faculty of Sciences
*Faculdade de Ciências de Lisboa, Campo Grande, Edifício C8, Sala 1.78
+
*Faculdade de Ciências de Lisboa, Campo Grande, Edifício C8, Gabinete 8.2.53
 
*1749-016 Lisboa, Portugal  
 
*1749-016 Lisboa, Portugal  
 
*[[Special:Emailuser/Margarida Gama-Carvalho|Email me through OpenWetWare]]
 
*[[Special:Emailuser/Margarida Gama-Carvalho|Email me through OpenWetWare]]
 
  
 
==Education==
 
==Education==
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* 2000, MS in Cell and Molecular Biology, Faculty of Medicine, University of Lisbon
 
* 2000, MS in Cell and Molecular Biology, Faculty of Medicine, University of Lisbon
 
* 1994, BS in Biology/Zoology, Faculty of Sciences, University of Lisbon
 
* 1994, BS in Biology/Zoology, Faculty of Sciences, University of Lisbon
 +
 +
==Positions==
 +
* Since 2011: Assistant Professor, Faculty of Sciences, Dept. of Chemistry and Biochemistry, University of Lisbon
 +
* Since 2009: Head of the Gene Expression and Bioinformatics Unit and RNA Biology and Bioinformatics Lab, BioFIG Center, Faculty of Sciences, University of Lisbon
 +
* 2003 to 2011: Assistant Professor, Faculty of Medicine, University of Lisbon
 +
* 2003: Visiting post-doctoral fellow, Pam Silver's lab, Dana Farber Cancer Institute/Harvard Medical School
 +
* 1996 to 2003: Teaching Assistant, Faculty of Medicine, University of Lisbon
  
 
==Research interests==
 
==Research interests==
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<biblio>
 
<biblio>
#Paper1 pmid=17137510
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#Paper1 pmid=23690977
//
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#Paper2 pmid=21611201
#Paper2 pmid=14993643
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#Paper3 pmid=21777085
//
+
#Paper4 pmid=17137510
#Paper3 pmid=12941606  
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#Paper5 pmid=14993643
#Paper4 pmid=11412848  
+
#Paper6 pmid=12941606  
#Paper5 pmid=11118443  
+
#Paper7 pmid=11412848  
#Paper6 pmid=9166400  
+
#Paper8 pmid=11118443  
 +
#Paper9 pmid=9166400  
  
 
</biblio>
 
</biblio>
 +
 
====Book Chapters====
 
====Book Chapters====
  
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==Lab page==
 
==Lab page==
*[[Gama Lab | Under construction]]
+
*[[Gama | Under construction]]
  
 
==Teaching==
 
==Teaching==
 
====Undergrad courses====
 
====Undergrad courses====
*[[BIOMOL_LCS/2010 | Biologia Molecular - Ciências da Saúde]]
+
*[[BIOMOL_LCS/2010 | Molecular Biology - Health Sciences]]
 +
* Biochemistry
  
 
==Notebooks==
 
==Notebooks==
* [[Margarida Gama-Carvalho:Notebook/Undergrad teaching | Teaching support]]
+
* [[User:Margarida Gama-Carvalho/Notebook/Undergrad teaching | Teaching support]]
  
 
==External links==
 
==External links==
 
http://biofig.fc.ul.pt/ <br>
 
http://biofig.fc.ul.pt/ <br>
http://www.fm.ul.pt <br>
+
http://www.fc.ul.pt <br>

Latest revision as of 15:08, 17 June 2013

Contact Info

Margarida
  • Margarida Gama-Carvalho
  • Assistant Professor, Faculty of Sciences, Dept. of Chemistry and Biochemistry, University of Lisbon
  • BioFIG - Center for Functional and Integrative Genomics, Faculty of Sciences
  • Faculdade de Ciências de Lisboa, Campo Grande, Edifício C8, Gabinete 8.2.53
  • 1749-016 Lisboa, Portugal
  • Email me through OpenWetWare

Education

  • 2003, PhD in Biomedical Sciences/Cell and Molecular Biology, Faculty of Medicine, University of Lisbon
  • 2000, MS in Cell and Molecular Biology, Faculty of Medicine, University of Lisbon
  • 1994, BS in Biology/Zoology, Faculty of Sciences, University of Lisbon

Positions

  • Since 2011: Assistant Professor, Faculty of Sciences, Dept. of Chemistry and Biochemistry, University of Lisbon
  • Since 2009: Head of the Gene Expression and Bioinformatics Unit and RNA Biology and Bioinformatics Lab, BioFIG Center, Faculty of Sciences, University of Lisbon
  • 2003 to 2011: Assistant Professor, Faculty of Medicine, University of Lisbon
  • 2003: Visiting post-doctoral fellow, Pam Silver's lab, Dana Farber Cancer Institute/Harvard Medical School
  • 1996 to 2003: Teaching Assistant, Faculty of Medicine, University of Lisbon

Research interests

  1. Post-transcriptional control of gene expression by RNA binding proteins and microRNAs
  2. Development of therapeutical applications
  3. Bioinformatics
  4. Systems and synthetic biology

Publications

Papers

  1. Brás-Rosário L, Matsuda A, Pinheiro AI, Gardner R, Lopes T, Amaral A, and Gama-Carvalho M. Expression profile of microRNAs regulating proliferation and differentiation in mouse adult cardiac stem cells. PLoS One. 2013;8(5):e63041. DOI:10.1371/journal.pone.0063041 | PubMed ID:23690977 | HubMed [Paper1]
  2. Moura-Alves P, Neves-Costa A, Raquel H, Pacheco TR, D'Almeida B, Rodrigues R, Cadima-Couto I, Chora Â, Oliveira M, Gama-Carvalho M, Hacohen N, and Moita LF. An shRNA-based screen of splicing regulators identifies SFRS3 as a negative regulator of IL-1β secretion. PLoS One. 2011;6(5):e19829. DOI:10.1371/journal.pone.0019829 | PubMed ID:21611201 | HubMed [Paper2]
  3. Barreto-Hernadez E, Gama-Carvalho M, and Sousa L. Pre-processing optimization of RNA immunoprecipitation microarray data. J Comput Biol. 2011 Oct;18(10):1319-28. DOI:10.1089/cmb.2010.0020 | PubMed ID:21777085 | HubMed [Paper3]
  4. Gama-Carvalho M, Barbosa-Morais NL, Brodsky AS, Silver PA, and Carmo-Fonseca M. Genome-wide identification of functionally distinct subsets of cellular mRNAs associated with two nucleocytoplasmic-shuttling mammalian splicing factors. Genome Biol. 2006;7(11):R113. DOI:10.1186/gb-2006-7-11-r113 | PubMed ID:17137510 | HubMed [Paper4]
  5. Lindberg A, Gama-Carvalho M, Carmo-Fonseca M, and Kreivi JP. A single RNA recognition motif in splicing factor ASF/SF2 directs it to nuclear sites of adenovirus transcription. J Gen Virol. 2004 Mar;85(Pt 3):603-8. DOI:10.1099/vir.0.19722-0 | PubMed ID:14993643 | HubMed [Paper5]
  6. Gama-Carvalho M, Condado I, and Carmo-Fonseca M. Regulation of adenovirus alternative RNA splicing correlates with a reorganization of splicing factors in the nucleus. Exp Cell Res. 2003 Sep 10;289(1):77-85. PubMed ID:12941606 | HubMed [Paper6]
  7. Gama-Carvalho M and Carmo-Fonseca M. The rules and roles of nucleocytoplasmic shuttling proteins. FEBS Lett. 2001 Jun 8;498(2-3):157-63. PubMed ID:11412848 | HubMed [Paper7]
  8. Gama-Carvalho M, Carvalho MP, Kehlenbach A, Valcarcel J, and Carmo-Fonseca M. Nucleocytoplasmic shuttling of heterodimeric splicing factor U2AF. J Biol Chem. 2001 Apr 20;276(16):13104-12. DOI:10.1074/jbc.M008759200 | PubMed ID:11118443 | HubMed [Paper8]
  9. Gama-Carvalho M, Krauss RD, Chiang L, Valcárcel J, Green MR, and Carmo-Fonseca M. Targeting of U2AF65 to sites of active splicing in the nucleus. J Cell Biol. 1997 Jun 2;137(5):975-87. PubMed ID:9166400 | HubMed [Paper9]
All Medline abstracts: PubMed | HubMed

Book Chapters

Gama-Carvalho M., and Carmo-Fonseca, M. (2006). Heterokaryon assays. In "Cell Biology – a Laboratory Handbook", ed. Julio Celis, Academic Press, London, UK.

Gama-Carvalho M., and Carmo-Fonseca, M. (2007). Tráfego de RNA e patogénese. In “O Mundo do RNA: Novos desafios e Perspectivas Futuras”, ed. Cecília M. Arraiano e Arsénio M. Fialho, Lidel, Lisboa, Portugal.

Lab page

Teaching

Undergrad courses

Notebooks

External links

http://biofig.fc.ul.pt/
http://www.fc.ul.pt