User:Margarida Gama-Carvalho: Difference between revisions
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*Margarida Gama-Carvalho | *Margarida Gama-Carvalho | ||
*Assistant Professor, Faculty of | *Assistant Professor, Faculty of Sciences, Dept. of Chemistry and Biochemistry, University of Lisbon | ||
*BioFIG - Center for Functional and Integrative Genomics, Faculty of Sciences | *BioFIG - Center for Functional and Integrative Genomics, Faculty of Sciences | ||
*Faculdade de Ciências de Lisboa, Campo Grande, Edifício C8, | *Faculdade de Ciências de Lisboa, Campo Grande, Edifício C8, Gabinete 8.2.53 | ||
*1749-016 Lisboa, Portugal | *1749-016 Lisboa, Portugal | ||
*[[Special:Emailuser/Margarida Gama-Carvalho|Email me through OpenWetWare]] | *[[Special:Emailuser/Margarida Gama-Carvalho|Email me through OpenWetWare]] | ||
==Education== | ==Education== | ||
| Line 15: | Line 14: | ||
* 2000, MS in Cell and Molecular Biology, Faculty of Medicine, University of Lisbon | * 2000, MS in Cell and Molecular Biology, Faculty of Medicine, University of Lisbon | ||
* 1994, BS in Biology/Zoology, Faculty of Sciences, University of Lisbon | * 1994, BS in Biology/Zoology, Faculty of Sciences, University of Lisbon | ||
==Positions== | |||
* Since 2011: Assistant Professor, Faculty of Sciences, Dept. of Chemistry and Biochemistry, University of Lisbon | |||
* Since 2009: Head of the Gene Expression and Bioinformatics Unit and RNA Biology and Bioinformatics Lab, BioFIG Center, Faculty of Sciences, University of Lisbon | |||
* 2003 to 2011: Assistant Professor, Faculty of Medicine, University of Lisbon | |||
* 2003: Visiting post-doctoral fellow, Pam Silver's lab, Dana Farber Cancer Institute/Harvard Medical School | |||
* 1996 to 2003: Teaching Assistant, Faculty of Medicine, University of Lisbon | |||
==Research interests== | ==Research interests== | ||
| Line 29: | Line 35: | ||
<biblio> | <biblio> | ||
#Paper1 pmid=17137510 | #Paper1 pmid=23690977 | ||
#Paper2 pmid=21611201 | |||
# | #Paper3 pmid=21777085 | ||
#Paper4 pmid=17137510 | |||
# | #Paper5 pmid=14993643 | ||
# | #Paper6 pmid=12941606 | ||
# | #Paper7 pmid=11412848 | ||
# | #Paper8 pmid=11118443 | ||
#Paper9 pmid=9166400 | |||
</biblio> | </biblio> | ||
====Book Chapters==== | ====Book Chapters==== | ||
| Line 47: | Line 55: | ||
==Lab page== | ==Lab page== | ||
*[[Gama | *[[Gama | Under construction]] | ||
==Teaching== | ==Teaching== | ||
====Undergrad courses==== | ====Undergrad courses==== | ||
*[[BIOMOL_LCS/2010 | | *[[BIOMOL_LCS/2010 | Molecular Biology - Health Sciences]] | ||
* Biochemistry | |||
==Notebooks== | ==Notebooks== | ||
* [[Margarida Gama-Carvalho | * [[User:Margarida Gama-Carvalho/Notebook/Undergrad teaching | Teaching support]] | ||
==External links== | ==External links== | ||
http://biofig.fc.ul.pt/ <br> | http://biofig.fc.ul.pt/ <br> | ||
http://www. | http://www.fc.ul.pt <br> | ||
Latest revision as of 16:08, 17 June 2013
Contact Info
- Margarida Gama-Carvalho
- Assistant Professor, Faculty of Sciences, Dept. of Chemistry and Biochemistry, University of Lisbon
- BioFIG - Center for Functional and Integrative Genomics, Faculty of Sciences
- Faculdade de Ciências de Lisboa, Campo Grande, Edifício C8, Gabinete 8.2.53
- 1749-016 Lisboa, Portugal
- Email me through OpenWetWare
Education
- 2003, PhD in Biomedical Sciences/Cell and Molecular Biology, Faculty of Medicine, University of Lisbon
- 2000, MS in Cell and Molecular Biology, Faculty of Medicine, University of Lisbon
- 1994, BS in Biology/Zoology, Faculty of Sciences, University of Lisbon
Positions
- Since 2011: Assistant Professor, Faculty of Sciences, Dept. of Chemistry and Biochemistry, University of Lisbon
- Since 2009: Head of the Gene Expression and Bioinformatics Unit and RNA Biology and Bioinformatics Lab, BioFIG Center, Faculty of Sciences, University of Lisbon
- 2003 to 2011: Assistant Professor, Faculty of Medicine, University of Lisbon
- 2003: Visiting post-doctoral fellow, Pam Silver's lab, Dana Farber Cancer Institute/Harvard Medical School
- 1996 to 2003: Teaching Assistant, Faculty of Medicine, University of Lisbon
Research interests
- Post-transcriptional control of gene expression by RNA binding proteins and microRNAs
- Development of therapeutical applications
- Bioinformatics
- Systems and synthetic biology
Publications
Papers
- Brás-Rosário L, Matsuda A, Pinheiro AI, Gardner R, Lopes T, Amaral A, and Gama-Carvalho M. Expression profile of microRNAs regulating proliferation and differentiation in mouse adult cardiac stem cells. PLoS One. 2013;8(5):e63041. DOI:10.1371/journal.pone.0063041 |
- Moura-Alves P, Neves-Costa A, Raquel H, Pacheco TR, D'Almeida B, Rodrigues R, Cadima-Couto I, Chora Â, Oliveira M, Gama-Carvalho M, Hacohen N, and Moita LF. An shRNA-based screen of splicing regulators identifies SFRS3 as a negative regulator of IL-1β secretion. PLoS One. 2011;6(5):e19829. DOI:10.1371/journal.pone.0019829 |
- Barreto-Hernadez E, Gama-Carvalho M, and Sousa L. Pre-processing optimization of RNA immunoprecipitation microarray data. J Comput Biol. 2011 Oct;18(10):1319-28. DOI:10.1089/cmb.2010.0020 |
- Gama-Carvalho M, Barbosa-Morais NL, Brodsky AS, Silver PA, and Carmo-Fonseca M. Genome-wide identification of functionally distinct subsets of cellular mRNAs associated with two nucleocytoplasmic-shuttling mammalian splicing factors. Genome Biol. 2006;7(11):R113. DOI:10.1186/gb-2006-7-11-r113 |
- Lindberg A, Gama-Carvalho M, Carmo-Fonseca M, and Kreivi JP. A single RNA recognition motif in splicing factor ASF/SF2 directs it to nuclear sites of adenovirus transcription. J Gen Virol. 2004 Mar;85(Pt 3):603-608. DOI:10.1099/vir.0.19722-0 |
- Gama-Carvalho M, Condado I, and Carmo-Fonseca M. Regulation of adenovirus alternative RNA splicing correlates with a reorganization of splicing factors in the nucleus. Exp Cell Res. 2003 Sep 10;289(1):77-85. DOI:10.1016/s0014-4827(03)00251-9 |
- Gama-Carvalho M and Carmo-Fonseca M. The rules and roles of nucleocytoplasmic shuttling proteins. FEBS Lett. 2001 Jun 8;498(2-3):157-63. DOI:10.1016/s0014-5793(01)02487-5 |
- Gama-Carvalho M, Carvalho MP, Kehlenbach A, Valcarcel J, and Carmo-Fonseca M. Nucleocytoplasmic shuttling of heterodimeric splicing factor U2AF. J Biol Chem. 2001 Apr 20;276(16):13104-12. DOI:10.1074/jbc.M008759200 |
- Gama-Carvalho M, Krauss RD, Chiang L, Valcárcel J, Green MR, and Carmo-Fonseca M. Targeting of U2AF65 to sites of active splicing in the nucleus. J Cell Biol. 1997 Jun 2;137(5):975-87. DOI:10.1083/jcb.137.5.975 |
Book Chapters
Gama-Carvalho M., and Carmo-Fonseca, M. (2006). Heterokaryon assays. In "Cell Biology – a Laboratory Handbook", ed. Julio Celis, Academic Press, London, UK.
Gama-Carvalho M., and Carmo-Fonseca, M. (2007). Tráfego de RNA e patogénese. In “O Mundo do RNA: Novos desafios e Perspectivas Futuras”, ed. Cecília M. Arraiano e Arsénio M. Fialho, Lidel, Lisboa, Portugal.
Lab page
Teaching
Undergrad courses
- Molecular Biology - Health Sciences
- Biochemistry
