User:Karmella Haynes/Notebook/PcTF Genomics/2013/01/06: Difference between revisions
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|style="background-color: #EEE"|[[Image:owwnotebook_icon.png|128px]]<span style="font-size:22px;">Pc-TF Genomics</span> | |style="background-color: #EEE"|[[Image:owwnotebook_icon.png|128px]]<span style="font-size:22px;">Pc-TF Genomics</span> | ||
|style="background-color: #F2F2F2" align="center"| | |style="background-color: #F2F2F2" align="center"|[[File:Report.png|frameless|link={{#sub:{{FULLPAGENAME}}|0|-11}}]][[{{#sub:{{FULLPAGENAME}}|0|-11}}|Main project page]]<br />{{#if:{{#lnpreventry:{{FULLPAGENAME}}}}|[[File:Resultset_previous.png|frameless|link={{#lnpreventry:{{FULLPAGENAME}}}}]][[{{#lnpreventry:{{FULLPAGENAME}}}}{{!}}Previous entry]] }}{{#if:{{#lnnextentry:{{FULLPAGENAME}}}}|[[{{#lnnextentry:{{FULLPAGENAME}}}}{{!}}Next entry]][[File:Resultset_next.png|frameless|link={{#lnnextentry:{{FULLPAGENAME}}}}]]}} | ||
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{| {{table}} | {| {{table}} | ||
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| Gene || Chromosome || Expected state || H3K27me3 max. DOC || H3K27me3 mock max. DOC || PcTF max. DOC || PcTF mock max. DOC | | Gene || Chromosome || Expected state || H3K27me3<br>max. DOC || H3K27me3 mock<br>max. DOC || PcTF<br>max. DOC || PcTF mock<br>max. DOC | ||
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| ALAS1 || chr 3 || active || ~160 || | | ALAS1 || chr 3 || active || ~160 || ~100 || ~10 || | ||
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| TBP || chr 6 || active || ~160 || | | TBP || chr 6 || active || ~160 || ~275 || ~16 || | ||
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| ACTB || chr 7 || active || ~180 | | ACTB || chr 7 || active || ~180 || ~1 || ~22 | ||
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| GUSB || chr 7 || active || ~160 | | GUSB || chr 7 || active || ~160 || ~240 || ~16 | ||
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| PPIA || chr 7 || active || ~90 | | PPIA || chr 7 || active || ~90 || ~480 || ~10 | ||
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| GAPDH || chr 12 || active || ~90 | | GAPDH || chr 12 || active || ~90 || ~240 || ~27 | ||
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| B2M || chr 15 || active || 0 | | B2M || chr 15 || active || 0 || ~1 || ~15 | ||
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| G6PD || chr X || active || ~130 | | G6PD || chr X (23) || active || ~130 || 0 || ~14 | ||
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| HPRT1 || chr X ( | | HPRT1 || chr X (23) || active || ~150 || ~320 || ~11 | ||
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| PGK1 || chr X ( | | PGK1 || chr X (23) || active || ~240 || ~475 || ~12 | ||
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| CDKN2A || chr9 || silent (H3K27me3+) || ~90 | | CDKN2A || chr9 || silent (H3K27me3+) || ~90 || ~650 || ~17 | ||
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| MMP12 || chr11 || silent (H3K27me3+) || ~18 | | MMP12 || chr11 || silent (H3K27me3+) || ~18 || ~1 || ~6 | ||
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| MYT1 || chr20 || silent (H3K27me3+) || '''~270''' | | MYT1 || chr20 || silent (H3K27me3+) || '''~270''' || ~525 || ~32 | ||
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| OLIG1 || chr21 || silent (H3K27me3+) || 0 | | OLIG1 || chr21 || silent (H3K27me3+) || 0 || 0 || ~5 || | ||
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| OLIG2 || chr21 || silent (H3K27me3+) || ~130 | | OLIG2 || chr21 || silent (H3K27me3+) || ~130 || 0 || 0 || | ||
|} | |} | ||
Latest revision as of 22:20, 26 September 2017
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01/06/13
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