Difference between revisions of "User:Karmella Haynes/Notebook/PcTF Genomics/2012/12/13"

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'''SeqMan Pro workflow'''<br>
+
'''SeqMan workflow'''<br>
# Open SeqMan Pro
+
# Open SeqMan NGen
 
#  
 
#  
  
Results
+
View Results
 +
# Open SeqMan Pro
 
# Two windows appear: (1) Report, (2) ''filename''.assembly
 
# Two windows appear: (1) Report, (2) ''filename''.assembly
 
# Double click on one of the alignments in ''filename''.assembly (e.g., NC_000001(1>249240538) NC_000001), to open "Alignment of ..." window
 
# Double click on one of the alignments in ''filename''.assembly (e.g., NC_000001(1>249240538) NC_000001), to open "Alignment of ..." window
# Select Contig > Strategy View
+
# Select Contig > Strategy View to view the enrichment histogram
  
  

Revision as of 10:39, 13 December 2012

Owwnotebook icon.pngPc-TF Genomics <html><img src="/images/9/94/Report.png" border="0" /></html> Main project page
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12/13/12

  • DNASTAR ChIP seq data analysis: SeqMan Pro

SeqMan workflow

  1. Open SeqMan NGen

View Results

  1. Open SeqMan Pro
  2. Two windows appear: (1) Report, (2) filename.assembly
  3. Double click on one of the alignments in filename.assembly (e.g., NC_000001(1>249240538) NC_000001), to open "Alignment of ..." window
  4. Select Contig > Strategy View to view the enrichment histogram